RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SNX11Q9Y5W9 270 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 RALGAPA1Q6GYQ0 2036 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 ARHGAP33O14559 1287 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 NDC80O14777 642 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 AVILO75366 819 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 SYPP08247 313 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 HOXC4P09017 264 aaPredicted RBP21.56■■□□□ 1.04
SNX1-206ENST00000559389 MYCLP1P12525 358 aaPredicted RBP21.56■■□□□ 1.04
SNX1-206ENST00000559389 ENGP17813 658 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 HADHAP40939 763 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 THOP1P52888 689 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 ITGA8P53708 1063 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 CRADDP78560 199 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 CDK3Q00526 305 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 PCID2Q5JVF3 399 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 ARMC3Q5W041 872 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 PDPK2PQ6A1A2 396 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 MACC1Q6ZN28 852 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 BBOF1Q8ND07 529 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 PTCD2Q8WV60 388 aaKnown RBP21.56■■□□□ 1.04
SNX1-206ENST00000559389 PEX13Q92968 403 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 SPATA16Q9BXB7 569 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 FRMD8Q9BZ67 464 aaPredicted RBP21.56■■□□□ 1.04
SNX1-206ENST00000559389 DPH5Q9H2P9 285 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 GDF3Q9NR23 364 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 PHPT1Q9NRX4 125 aaPredicted RBP21.56■■□□□ 1.04
SNX1-206ENST00000559389 NLE1Q9NVX2 485 aaPredicted RBP21.56■■□□□ 1.04
SNX1-206ENST00000559389 WHRNQ9P202 907 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 FKBPLQ9UIM3 349 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 RIMKLBQ9ULI2 386 aa21.56■■□□□ 1.04
SNX1-206ENST00000559389 FNDC3AQ9Y2H6 1198 aaKnown RBP21.56■■□□□ 1.04
SNX1-206ENST00000559389 LRP4O75096 1905 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 GLYATL1P3A0A0U1RQE8 302 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 SPTY2D1-AS1A0A0U1RR47 76 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 CCDC78A2IDD5 438 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 H7C0S8 307 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 CACNB4O00305 520 aaPredicted RBP21.55■■□□□ 1.04
SNX1-206ENST00000559389 FOXD2O60548 495 aaPredicted RBP21.55■■□□□ 1.04
SNX1-206ENST00000559389 ACVR1Q04771 509 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 FZD2Q14332 565 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 TSTD2Q5T7W7 516 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 IL27RAQ6UWB1 636 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 FAM151BQ6UXP7 276 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 MPP5Q8N3R9 675 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 LGR4Q9BXB1 951 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 MRM3Q9HC36 420 aaKnown RBP21.55■■□□□ 1.04
SNX1-206ENST00000559389 GRHL1Q9NZI5 618 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 TMEM131Q92545 1883 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 GON4LQ3T8J9 2241 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 ADAMTS9Q9P2N4 1935 aa21.55■■□□□ 1.04
SNX1-206ENST00000559389 CACNA1EQ15878 2313 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 CCL22O00626 93 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 PLA2G5P39877 138 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 TMPRSS15P98073 1019 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 XIAPP98170 497 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 PTK2BQ14289 1009 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 CHRNA6Q15825 494 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 ZNF423Q2M1K9 1284 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 NLRP9Q7RTR0 991 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 PARGQ86W56 976 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 AGGF1Q8N302 714 aaeCLIP21.54■■□□□ 1.04
SNX1-206ENST00000559389 GPR161Q8N6U8 529 aaKnown RBP21.54■■□□□ 1.04
SNX1-206ENST00000559389 OR13J1Q8NGT2 312 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 COX14Q96I36 57 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 ZNF778Q96MU6 729 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 VPS35Q96QK1 796 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 EDEM2Q9BV94 578 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 ERVMER34-1Q9H9K5 563 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 SMOXQ9NWM0 555 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 ANAPC5Q9UJX4 755 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 APPL1Q9UKG1 709 aa21.54■■□□□ 1.04
SNX1-206ENST00000559389 CNOT6Q9ULM6 557 aaKnown RBP21.54■■□□□ 1.04
SNX1-206ENST00000559389 PI4KAP42356 2102 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 INPP4BO15327 924 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 GPR39O43194 453 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 PRAMEF1O95521 474 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 HTR1BP28222 390 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 ARSDP51689 593 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 SLC7A5Q01650 507 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 CALCOCO2Q13137 446 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 PEX6Q13608 980 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 SKIDA1Q1XH10 827 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 ATP13A5Q4VNC0 1218 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 OXR1Q8N573 874 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 SEC14L1Q92503 715 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 HIC2Q96JB3 615 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 WDR92Q96MX6 357 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 KIFC1Q9BW19 673 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 CHRAC1Q9NRG0 131 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 RXFP3Q9NSD7 469 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 TREX1Q9NSU2 369 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 SLC2A6Q9UGQ3 507 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 SOX13Q9UN79 622 aa21.53■■□□□ 1.04
SNX1-206ENST00000559389 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.53■■□□□ 1.04
SNX1-206ENST00000559389 SDR42E2A6NKP2 422 aa21.52■■□□□ 1.04
SNX1-206ENST00000559389 BHMG1C9JSJ3 638 aaPredicted RBP21.52■■□□□ 1.04
SNX1-206ENST00000559389 SRP72O76094 671 aaKnown RBP21.52■■□□□ 1.04
SNX1-206ENST00000559389 CER1O95813 267 aa21.52■■□□□ 1.04
SNX1-206ENST00000559389 KELP23276 732 aa21.52■■□□□ 1.04
SNX1-206ENST00000559389 EIF2B5Q13144 721 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms