RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 AQP9O43315 295 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 HOXC4P09017 264 aaPredicted RBP18.6■□□□□ 0.57
CASC4-209ENST00000559222 HTR1BP28222 390 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 TEAD1P28347 426 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 DRICH1Q6PGQ1 229 aaPredicted RBP18.6■□□□□ 0.57
CASC4-209ENST00000559222 GLT6D1Q7Z4J2 308 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 SFTPA2Q8IWL1 248 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 OR4C6Q8NH72 309 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 COX14Q96I36 57 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 CNDP2Q96KP4 475 aaKnown RBP18.6■□□□□ 0.57
CASC4-209ENST00000559222 CYP4F12Q9HCS2 524 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 KCTD5Q9NXV2 234 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 IL17CQ9P0M4 197 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 FTSJ1Q9UET6 329 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 MOSPD1Q9UJG1 213 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 U3KQA8 63 aa18.6■□□□□ 0.57
CASC4-209ENST00000559222 ZFC3H1O60293 1989 aaKnown RBP18.6■□□□□ 0.57
CASC4-209ENST00000559222 PTPRBP23467 1997 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 GAPDHSO14556 408 aaPredicted RBP18.59■□□□□ 0.57
CASC4-209ENST00000559222 RASGRP1O95267 797 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 AP2A1O95782 977 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 TPH1P17752 444 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 STIP1P31948 543 aaKnown RBP18.59■□□□□ 0.57
CASC4-209ENST00000559222 GRIA1P42261 906 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 TRIP13Q15645 432 aaPredicted RBP18.59■□□□□ 0.57
CASC4-209ENST00000559222 PROX2Q3B8N5 592 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 NLRP8Q86W28 1048 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 MAIP1Q8WWC4 291 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 SPATA16Q9BXB7 569 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 SLC13A1Q9BZW2 595 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 TMEM168Q9H0V1 697 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 TTC7AQ9ULT0 858 aaPredicted RBP18.59■□□□□ 0.57
CASC4-209ENST00000559222 DRG1Q9Y295 367 aaKnown RBP18.59■□□□□ 0.57
CASC4-209ENST00000559222 ZKSCAN5Q9Y2L8 839 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 PLEKHM1Q9Y4G2 1056 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 ST14Q9Y5Y6 855 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 SPEGQ15772 3267 aa18.59■□□□□ 0.57
CASC4-209ENST00000559222 BPTFQ12830 3046 aa18.58■□□□□ 0.57
CASC4-209ENST00000559222 PGRMC1O00264 195 aaKnown RBP18.58■□□□□ 0.56
CASC4-209ENST00000559222 CCL22O00626 93 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 ZNF189O75820 626 aaPredicted RBP18.58■□□□□ 0.56
CASC4-209ENST00000559222 LDOC1O95751 146 aaPredicted RBP18.58■□□□□ 0.56
CASC4-209ENST00000559222 FTH1P19P0C7X4 201 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 HMGCLP35914 325 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 TNNT3P45378 269 aaPredicted RBP18.58■□□□□ 0.56
CASC4-209ENST00000559222 CLDN6P56747 220 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 DCDC1P59894 354 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 INAVAQ3KP66 663 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 KHDC1Q4VXA5 237 aaKnown RBP18.58■□□□□ 0.56
CASC4-209ENST00000559222 CCDC157Q569K6 752 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 MARK2Q7KZI7 788 aaKnown RBP18.58■□□□□ 0.56
CASC4-209ENST00000559222 GLRX5Q86SX6 157 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 CCDC89Q8N998 374 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 OR13C4Q8NGS5 318 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 HIC2Q96JB3 615 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 LRRC40Q9H9A6 602 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 RAB6BQ9NRW1 208 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 NLGN3Q9NZ94 848 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 NFKBIL1Q9UBC1 381 aaPredicted RBP18.58■□□□□ 0.56
CASC4-209ENST00000559222 SPASTQ9UBP0 616 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 SUFUQ9UMX1 484 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 SLC17A4Q9Y2C5 497 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 PRKAB1Q9Y478 270 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 DGKBQ9Y6T7 804 aa18.58■□□□□ 0.56
CASC4-209ENST00000559222 COL27A1Q8IZC6 1860 aaPredicted RBP18.57■□□□□ 0.56
CASC4-209ENST00000559222 RGSL1A5PLK6 1076 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 YY2O15391 372 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 MTX2O75431 263 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 TNFP01375 233 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 SPINK2P20155 84 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 GNPDA1P46926 289 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 TERF1P54274 439 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 SEMA5AQ13591 1074 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 FAM151BQ6UXP7 276 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 RAVER1Q8IY67 606 aaKnown RBP18.57■□□□□ 0.56
CASC4-209ENST00000559222 OR4K2Q8NGD2 314 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 OR52K1Q8NGK4 314 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 ACTRT1Q8TDG2 376 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 BTN2A2Q8WVV5 523 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 CAPZA3Q96KX2 299 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 TRABDQ9H4I3 376 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 CARS2Q9HA77 564 aaKnown RBP18.57■□□□□ 0.56
CASC4-209ENST00000559222 ARNT2Q9HBZ2 717 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 IL26Q9NPH9 171 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 HACD3Q9P035 362 aa18.57■□□□□ 0.56
CASC4-209ENST00000559222 CCDC78A2IDD5 438 aa18.56■□□□□ 0.56
CASC4-209ENST00000559222 TNFRSF10CO14798 259 aa18.56■□□□□ 0.56
CASC4-209ENST00000559222 CASC3O15234 703 aaKnown RBP18.56■□□□□ 0.56
CASC4-209ENST00000559222 TNFSF14O43557 240 aa18.56■□□□□ 0.56
CASC4-209ENST00000559222 ADRB1P08588 477 aa18.56■□□□□ 0.56
CASC4-209ENST00000559222 KELP23276 732 aa18.56■□□□□ 0.56
CASC4-209ENST00000559222 AK4P27144 223 aaPredicted RBP18.56■□□□□ 0.56
CASC4-209ENST00000559222 FDFT1P37268 417 aa18.56■□□□□ 0.56
CASC4-209ENST00000559222 ACADVLP49748 655 aa18.56■□□□□ 0.56
CASC4-209ENST00000559222 VPS41P49754 854 aa18.56■□□□□ 0.56
CASC4-209ENST00000559222 ZNF140P52738 457 aaPredicted RBP18.56■□□□□ 0.56
CASC4-209ENST00000559222 TMPRSS15P98073 1019 aa18.56■□□□□ 0.56
CASC4-209ENST00000559222 FOXC1Q12948 553 aa18.56■□□□□ 0.56
CASC4-209ENST00000559222 TAF1AQ15573 450 aaPredicted RBP18.56■□□□□ 0.56
CASC4-209ENST00000559222 CHRNA6Q15825 494 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms