RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 ITPR1Q14643 2758 aa17.5■□□□□ 0.39
SMAD3-210ENST00000559092 B4DGG1 531 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 PJA2O43164 708 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 ZW10O43264 779 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 MPOP05164 745 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 MLLT3P42568 568 aaPredicted RBP17.49■□□□□ 0.39
SMAD3-210ENST00000559092 NAP1L1P55209 391 aaKnown RBP17.49■□□□□ 0.39
SMAD3-210ENST00000559092 GABREP78334 506 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 CCL7P80098 99 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 CTBSQ01459 385 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 GALNT3Q14435 633 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 LLGL1Q15334 1064 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 PYCR3Q53H96 274 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 RAD9BQ6WBX8 426 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 LRRC69Q6ZNQ3 347 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 B4GALNT4Q76KP1 1039 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 TMC3Q7Z5M5 1100 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 CCNJLQ8IV13 435 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 TXLNBQ8N3L3 684 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 SPATA22Q8NHS9 363 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 ZDHHC1Q8WTX9 485 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 HNRNPLLQ8WVV9 542 aaKnown RBP17.49■□□□□ 0.39
SMAD3-210ENST00000559092 ATXN7L3BQ96GX2 97 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 OR2M4Q96R27 311 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 BAG1Q99933 345 aaPredicted RBP17.49■□□□□ 0.39
SMAD3-210ENST00000559092 LRRN3Q9H3W5 708 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 RMI1Q9H9A7 625 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 NFKBIL1Q9UBC1 381 aaPredicted RBP17.49■□□□□ 0.39
SMAD3-210ENST00000559092 FAM153AQ9UHL3 310 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 TRHDEQ9UKU6 1024 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 TMEM98Q9Y2Y6 226 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 REXO2Q9Y3B8 237 aaKnown RBP17.49■□□□□ 0.39
SMAD3-210ENST00000559092 DUSP10Q9Y6W6 482 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 FAM208BQ5VWN6 2430 aa17.49■□□□□ 0.39
SMAD3-210ENST00000559092 LRRK1Q38SD2 2015 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 ZFYVE26Q68DK2 2539 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 CCDC66A2RUB6 948 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 APOC4-APOC2K7ER74 178 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 MT-CYBP00156 380 aaPredicted RBP17.48■□□□□ 0.39
SMAD3-210ENST00000559092 APOC2P02655 101 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 RPLP0P05388 317 aaKnown RBP17.48■□□□□ 0.39
SMAD3-210ENST00000559092 CDC25BP30305 580 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 CD68P34810 354 aaPredicted RBP17.48■□□□□ 0.39
SMAD3-210ENST00000559092 PTPN7P35236 360 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 MARCKSL1P49006 195 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 VAV2P52735 878 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 DCDC1P59894 354 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 PCSK7Q16549 785 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 DOK6Q6PKX4 331 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 C19orf48Q6RUI8 117 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 LYSMD3Q7Z3D4 306 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 KDELC2Q7Z4H8 507 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 ZC3H18Q86VM9 953 aaKnown RBP17.48■□□□□ 0.39
SMAD3-210ENST00000559092 GALNT13Q8IUC8 556 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 WDR36Q8NI36 951 aaKnown RBP17.48■□□□□ 0.39
SMAD3-210ENST00000559092 PTCD2Q8WV60 388 aaKnown RBP17.48■□□□□ 0.39
SMAD3-210ENST00000559092 HTR3CQ8WXA8 447 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 EID2BQ96D98 161 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 LIN37Q96GY3 246 aaPredicted RBP17.48■□□□□ 0.39
SMAD3-210ENST00000559092 SLC46A1Q96NT5 459 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 QKIQ96PU8 341 aaKnown RBP eCLIP17.48■□□□□ 0.393e-6■■□□□ 13.7
SMAD3-210ENST00000559092 FCRL5Q96RD9 977 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 FERMT1Q9BQL6 677 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 LACRTQ9GZZ8 138 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 ST14Q9Y5Y6 855 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 RNF215Q9Y6U7 377 aa17.48■□□□□ 0.39
SMAD3-210ENST00000559092 LOC285095A0A1B0GVY8 99 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 A0A1W2PQM1 296 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 D6RAR5 112 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 INPP4BO15327 924 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 PMPCBO75439 489 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 CTNNA2P26232 953 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 AK4P27144 223 aaPredicted RBP17.47■□□□□ 0.39
SMAD3-210ENST00000559092 RBMS1P29558 406 aaKnown RBP17.47■□□□□ 0.39
SMAD3-210ENST00000559092 CETN2P41208 172 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 TNNT3P45378 269 aaPredicted RBP17.47■□□□□ 0.39
SMAD3-210ENST00000559092 PDX1P52945 283 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 RWDD2BP57060 319 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 EIF3IQ13347 325 aaKnown RBP17.47■□□□□ 0.39
SMAD3-210ENST00000559092 CLPPQ16740 277 aaPredicted RBP17.47■□□□□ 0.39
SMAD3-210ENST00000559092 COL28A1Q2UY09 1125 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 PDPK2PQ6A1A2 396 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 SLC30A9Q6PML9 568 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 PID1Q7Z2X4 250 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 ZNF438Q7Z4V0 828 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 SPRED1Q7Z699 444 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 TRIM74Q86UV6 250 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 TMEM74Q96NL1 305 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 DCBLD2Q96PD2 775 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 ZSCAN5AQ9BUG6 496 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 HEMGNQ9BXL5 484 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 GPR63Q9BZJ6 419 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 STRADBQ9C0K7 418 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 TRABDQ9H4I3 376 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 SUDS3Q9H7L9 328 aaPredicted RBP17.47■□□□□ 0.39
SMAD3-210ENST00000559092 THSD1Q9NS62 852 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 KLHL8Q9P2G9 620 aaPredicted RBP17.47■□□□□ 0.39
SMAD3-210ENST00000559092 SATB2Q9UPW6 733 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 ASXL3Q9C0F0 2248 aa17.47■□□□□ 0.39
SMAD3-210ENST00000559092 ANKRD36A6QL64 1941 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms