RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 MAK16Q9BXY0 300 aaKnown RBP16.92■□□□□ 0.3
LRRC28-210ENST00000558879 SLC25A51Q9H1U9 297 aa16.92■□□□□ 0.3
LRRC28-210ENST00000558879 NFKBIL1Q9UBC1 381 aaPredicted RBP16.92■□□□□ 0.3
LRRC28-210ENST00000558879 SSUH2Q9Y2M2 353 aa16.92■□□□□ 0.3
LRRC28-210ENST00000558879 SMG1Q96Q15 3661 aaKnown RBP16.91■□□□□ 0.3
LRRC28-210ENST00000558879 PECAM1P16284 738 aaPredicted RBP16.91■□□□□ 0.3
LRRC28-210ENST00000558879 MAGEA1P43355 309 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 MAZP56270 477 aaKnown RBP16.91■□□□□ 0.3
LRRC28-210ENST00000558879 CCDC173Q0VFZ6 552 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 EIF3IQ13347 325 aaKnown RBP16.91■□□□□ 0.3
LRRC28-210ENST00000558879 GALNT3Q14435 633 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 PYCR3Q53H96 274 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 SOWAHCQ53LP3 525 aaPredicted RBP16.91■□□□□ 0.3
LRRC28-210ENST00000558879 FAM182AQ5T1J6 154 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 DOK6Q6PKX4 331 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 SPOCD1Q6ZMY3 1216 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 LYSMD3Q7Z3D4 306 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 CCDC170Q8IYT3 715 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 EID2BQ96D98 161 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 MRFAP1L1Q96HT8 127 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 TMEM74Q96NL1 305 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 BBC3Q96PG8 261 aaPredicted RBP16.91■□□□□ 0.3
LRRC28-210ENST00000558879 ADGRE3Q9BY15 652 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 SUDS3Q9H7L9 328 aaPredicted RBP16.91■□□□□ 0.3
LRRC28-210ENST00000558879 PKD2L2Q9NZM6 624 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 VPS18Q9P253 973 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 LRIT1Q9P2V4 623 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 CNOT6Q9ULM6 557 aaKnown RBP16.91■□□□□ 0.3
LRRC28-210ENST00000558879 ALG6Q9Y672 507 aa16.91■□□□□ 0.3
LRRC28-210ENST00000558879 hCG_1818297A0A087WSY0 165 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 RGSL1A5PLK6 1076 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 FADS2P1A8MWK0 482 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 DNAJC6O75061 913 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 ITGA2BP08514 1039 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 PTPN3P26045 913 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 MARCKSL1P49006 195 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 NR2C2P49116 596 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 INHBCP55103 352 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 DCDC1P59894 354 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 B4GALNT1Q00973 533 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 ZFP36L1Q07352 338 aaKnown RBP16.9■□□□□ 0.3
LRRC28-210ENST00000558879 ADCY2Q08462 1091 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 TEX44Q53QW1 395 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 TFDP3Q5H9I0 405 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 SLC30A9Q6PML9 568 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 TMPRSS9Q7Z410 1059 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 NT5DC3Q86UY8 548 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 SLITRK4Q8IW52 837 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 KATNAL2Q8IYT4 538 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 PATE1Q8WXA2 126 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 AGAP3Q96P47 875 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 FOXP3Q9BZS1 431 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 TFR2Q9UP52 801 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 TMEM98Q9Y2Y6 226 aa16.9■□□□□ 0.3
LRRC28-210ENST00000558879 PCYT1BQ9Y5K3 369 aaPredicted RBP16.9■□□□□ 0.3
LRRC28-210ENST00000558879 OAS3Q9Y6K5 1087 aaKnown RBP16.9■□□□□ 0.3
LRRC28-210ENST00000558879 MGAQ8IWI9 3026 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 TMX2-CTNND1H3BSU7 103 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 INPP4BO15327 924 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 CST8O60676 142 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 ECEL1O95672 775 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 TNNT1P13805 278 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 ACTR1BP42025 376 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 ACTR1AP61163 376 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 PEX6Q13608 980 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 LRP8Q14114 963 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 TFDP2Q14188 446 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 ODF2Q5BJF6 829 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 B4GALNT4Q76KP1 1039 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 BZW1Q7L1Q6 419 aaKnown RBP16.89■□□□□ 0.29
LRRC28-210ENST00000558879 KCNE4Q8WWG9 221 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 TEKT5Q96M29 485 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 FCRL3Q96P31 734 aaPredicted RBP16.89■□□□□ 0.29
LRRC28-210ENST00000558879 PANX2Q96RD6 677 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 GLOD4Q9HC38 313 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 MAGEE1Q9HCI5 957 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 EPB41L5Q9HCM4 733 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 SAE1Q9UBE0 346 aaPredicted RBP16.89■□□□□ 0.29
LRRC28-210ENST00000558879 ATXN7L1Q9ULK2 861 aaPredicted RBP16.89■□□□□ 0.29
LRRC28-210ENST00000558879 PLEKHM1Q9Y4G2 1056 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 PCDHA13Q9Y5I0 950 aa16.89■□□□□ 0.29
LRRC28-210ENST00000558879 PLD2O14939 933 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 MT-CYBP00156 380 aaPredicted RBP16.88■□□□□ 0.29
LRRC28-210ENST00000558879 RBMS1P29558 406 aaKnown RBP16.88■□□□□ 0.29
LRRC28-210ENST00000558879 CD68P34810 354 aaPredicted RBP16.88■□□□□ 0.29
LRRC28-210ENST00000558879 CYLC1P35663 651 aaPredicted RBP16.88■□□□□ 0.29
LRRC28-210ENST00000558879 ZNF75DP51815 510 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 CDK18Q07002 472 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 WASHC5Q12768 1159 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 PPP2R5EQ16537 467 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 RAB11FIP2Q7L804 512 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 GALNT13Q8IUC8 556 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 ARL14Q8N4G2 192 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 Q8N9G6 341 aaPredicted RBP16.88■□□□□ 0.29
LRRC28-210ENST00000558879 SPATA22Q8NHS9 363 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 CCHCR1Q8TD31 782 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 TFB1MQ8WVM0 346 aaKnown RBP16.88■□□□□ 0.29
LRRC28-210ENST00000558879 DPH1Q9BZG8 443 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 STRADBQ9C0K7 418 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 RBSNQ9H1K0 784 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms