RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SNX24Q9Y343 169 aa17.36■□□□□ 0.37
TPM1-214ENST00000558544 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.36■□□□□ 0.37
TPM1-214ENST00000558544 HEATR9A2RTY3 570 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 CCL22O00626 93 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 TOR1BO14657 336 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 INPP4BO15327 924 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 PPFIA2O75334 1257 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 SEC31AO94979 1220 aaKnown RBP17.35■□□□□ 0.37
TPM1-214ENST00000558544 PYGLP06737 847 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 TRIM23P36406 574 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 NPY2RP49146 381 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 ITGA8P53708 1063 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 CDK3Q00526 305 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 NFATC4Q14934 902 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 AASDHQ4L235 1098 aaPredicted RBP17.35■□□□□ 0.37
TPM1-214ENST00000558544 ZDHHC20Q5W0Z9 365 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 ADAMTSL4Q6UY14 1074 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 DCP2Q8IU60 420 aaKnown RBP17.35■□□□□ 0.37
TPM1-214ENST00000558544 MMGT1Q8N4V1 131 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 TRAM1L1Q8N609 369 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 OR2I1PQ8NGU4 316 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 LRRC1Q9BTT6 524 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 ZSCAN5AQ9BUG6 496 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 EDEM2Q9BV94 578 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 LGR4Q9BXB1 951 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 IL22Q9GZX6 179 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 CDH19Q9H159 772 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 IL26Q9NPH9 171 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 PHPT1Q9NRX4 125 aaPredicted RBP17.35■□□□□ 0.37
TPM1-214ENST00000558544 RXFP3Q9NSD7 469 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 UTP11Q9Y3A2 253 aaKnown RBP17.35■□□□□ 0.37
TPM1-214ENST00000558544 TCAF1Q9Y4C2 921 aa17.35■□□□□ 0.37
TPM1-214ENST00000558544 GLYATL1P3A0A0U1RQE8 302 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 MROH6A6NGR9 719 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 CACNB4O00305 520 aaPredicted RBP17.34■□□□□ 0.37
TPM1-214ENST00000558544 GAPDHSO14556 408 aaPredicted RBP17.34■□□□□ 0.37
TPM1-214ENST00000558544 MYCLP1P12525 358 aaPredicted RBP17.34■□□□□ 0.37
TPM1-214ENST00000558544 MLNP12872 115 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 ADRA1DP25100 572 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 TEAD1P28347 426 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 PLA2G5P39877 138 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 ATXN3P54252 364 aaPredicted RBP17.34■□□□□ 0.37
TPM1-214ENST00000558544 KIAA1024LP59773 190 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 SLC7A5Q01650 507 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 PTK2BQ14289 1009 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 FZD2Q14332 565 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 MORF4L2Q15014 288 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 HLA-BQ31612 363 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 PCID2Q5JVF3 399 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 PRAMEF14Q5SWL7 426 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 HIBCHQ6NVY1 386 aaPredicted RBP17.34■□□□□ 0.37
TPM1-214ENST00000558544 IL27RAQ6UWB1 636 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 MACC1Q6ZN28 852 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 MICALCLQ6ZW33 695 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 TRIM74Q86UV6 250 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 MPP5Q8N3R9 675 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 STYXQ8WUJ0 223 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 TEX101Q9BY14 249 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 ZDHHC5Q9C0B5 715 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 RAB17Q9H0T7 212 aa17.34■□□□□ 0.37
TPM1-214ENST00000558544 NLE1Q9NVX2 485 aaPredicted RBP17.34■□□□□ 0.37
TPM1-214ENST00000558544 ZFC3H1O60293 1989 aaKnown RBP17.34■□□□□ 0.37
TPM1-214ENST00000558544 GVINP1Q7Z2Y8 2422 aa17.33■□□□□ 0.37
TPM1-214ENST00000558544 SPTY2D1-AS1A0A0U1RR47 76 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 GPR39O43194 453 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 PRAMEF1O95521 474 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 HTR1BP28222 390 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 HADHAP40939 763 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 MAGEA3P43357 314 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 CHRNA6Q15825 494 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 ATP13A5Q4VNC0 1218 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 ZNF542PQ5EBM4 170 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 TSTD2Q5T7W7 516 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 DUPD1Q68J44 220 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 ENPP7Q6UWV6 458 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 PARGQ86W56 976 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 MINDY1Q8N5J2 469 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 ZNF778Q96MU6 729 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 WDR92Q96MX6 357 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 GAREM1Q9H706 876 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 CAAP1Q9H8G2 361 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 IL21RQ9HBE5 538 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 CHRAC1Q9NRG0 131 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 SLC2A6Q9UGQ3 507 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 ANAPC5Q9UJX4 755 aa17.33■□□□□ 0.36
TPM1-214ENST00000558544 TMEM202A6NGA9 273 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 CER1O95813 267 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 HOXC4P09017 264 aaPredicted RBP17.32■□□□□ 0.36
TPM1-214ENST00000558544 MC4RP32245 332 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 XIAPP98170 497 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 EIF2B5Q13144 721 aaKnown RBP17.32■□□□□ 0.36
TPM1-214ENST00000558544 PEX6Q13608 980 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 LAMB3Q13751 1172 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 ZNF423Q2M1K9 1284 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 PDPK2PQ6A1A2 396 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 CASC4Q6P4E1 433 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 DOK6Q6PKX4 331 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 KIAA2013Q8IYS2 634 aa17.32■□□□□ 0.36
TPM1-214ENST00000558544 GPR161Q8N6U8 529 aaKnown RBP17.32■□□□□ 0.36
TPM1-214ENST00000558544 OR13J1Q8NGT2 312 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms