RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 FBXO5Q9UKT4 447 aa14.82□□□□□ -0.04
VPS18-202ENST00000558474 LRRC72A6NJI9 287 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 PLK4O00444 970 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 GAPDHSO14556 408 aaPredicted RBP14.81□□□□□ -0.04
VPS18-202ENST00000558474 RGS16O15492 202 aaPredicted RBP14.81□□□□□ -0.04
VPS18-202ENST00000558474 LZTS3O60299 673 aaPredicted RBP14.81□□□□□ -0.04
VPS18-202ENST00000558474 TM7SF2O76062 418 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 PRAMEF1O95521 474 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 TEAD1P28347 426 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 SLC1A2P43004 574 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 CCR3P51677 355 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 CLCN5P51795 746 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 ADARP55265 1226 aaKnown RBP14.81□□□□□ -0.04
VPS18-202ENST00000558474 EFTUD2Q15029 972 aaKnown RBP eCLIP14.81□□□□□ -0.04
VPS18-202ENST00000558474 ACOX1Q15067 660 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 ZNF284Q2VY69 593 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 TNFAIP8L3Q5GJ75 292 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 AGBL2Q5U5Z8 902 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 Q6ZVL8 140 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 STRA8Q7Z7C7 330 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 OR14C36Q8NHC7 312 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 ZNF398Q8TD17 642 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 HMGB4Q8WW32 186 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 VPS35Q96QK1 796 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 AGAP2Q99490 1192 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 RBBP8Q99708 897 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 WRAP53Q9BUR4 548 aaKnown RBP14.81□□□□□ -0.04
VPS18-202ENST00000558474 C1QTNF7Q9BXJ2 289 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 BTBD1Q9H0C5 482 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 RHOJQ9H4E5 214 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 ASB8Q9H765 288 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 SUDS3Q9H7L9 328 aaPredicted RBP14.81□□□□□ -0.04
VPS18-202ENST00000558474 TMBIM4Q9HC24 238 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 SENP1Q9P0U3 644 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 BCCIPQ9P287 314 aaKnown RBP eCLIP14.81□□□□□ -0.04
VPS18-202ENST00000558474 ITM2BQ9Y287 266 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 COMMD10Q9Y6G5 202 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 COL6A3P12111 3177 aa14.81□□□□□ -0.04
VPS18-202ENST00000558474 A0A0U1RQS6 177 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 TLDC2A0PJX2 215 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 GOLGA8KD6RF30 607 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 GOLGA8TH3BQL2 631 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 MMP20O60882 483 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 FAM155BO75949 473 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 RECQL5O94762 991 aaPredicted RBP14.8□□□□□ -0.04
VPS18-202ENST00000558474 PCDH8O95206 1070 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 AHSGP02765 367 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 SNRPAP09012 282 aaKnown RBP14.8□□□□□ -0.04
VPS18-202ENST00000558474 GM2AP17900 193 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 AOC1P19801 751 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 PMLP29590 882 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 HOXA6P31267 233 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 ETV3P41162 512 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 PTGER3P43115 390 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 CXCL12P48061 93 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 CD151P48509 253 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 LIMK2P53671 638 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 SEMG2Q02383 582 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 ITIH4Q14624 930 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 TMEM259Q4ZIN3 620 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 HSP90B2PQ58FF3 399 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 ZRANB3Q5FWF4 1079 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 CWF19L1Q69YN2 538 aaKnown RBP14.8□□□□□ -0.04
VPS18-202ENST00000558474 FAM151BQ6UXP7 276 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 TIFABQ6ZNK6 161 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 TRIM69Q86WT6 500 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 HORMAD1Q86X24 394 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 PGBD3Q8N328 593 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 OTUD6BQ8N6M0 293 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 OR2T34Q8NGX1 318 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 HEXDCQ8WVB3 486 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 AP2M1Q96CW1 435 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 NUS1Q96E22 293 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 C1QTNF2Q9BXJ5 285 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 SLC6A17Q9H1V8 727 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 IL1RAPL1Q9NZN1 696 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 DLGAP2Q9P1A6 1054 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 PLXND1Q9Y4D7 1925 aa14.8□□□□□ -0.04
VPS18-202ENST00000558474 CCDC163A0A0D9SF12 145 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 OR51F1A6NGY5 319 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 C10orf142B7Z368 130 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 CCL22O00626 93 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 S1PR4O95977 384 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 NUDT1P36639 197 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 SLCO1A2P46721 670 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 MTAPQ13126 283 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 CTBP1Q13363 440 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 CHRNA6Q15825 494 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 SETMARQ53H47 684 aaPredicted RBP14.79□□□□□ -0.04
VPS18-202ENST00000558474 ZC3HC1Q86WB0 502 aaKnown RBP14.79□□□□□ -0.04
VPS18-202ENST00000558474 CACUL1Q86Y37 369 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 DENND6AQ8IWF6 608 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 NXPE1Q8N323 547 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 FLCNQ8NFG4 579 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 ERLEC1Q96DZ1 483 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 NECAB3Q96P71 396 aaPredicted RBP14.79□□□□□ -0.04
VPS18-202ENST00000558474 PCED1AQ9H1Q7 454 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 ABCG8Q9H221 673 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 CRLS1Q9UJA2 301 aa14.79□□□□□ -0.04
VPS18-202ENST00000558474 ACTL7BQ9Y614 415 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms