RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 TECPR1Q7Z6L1 1165 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 TRIM69Q86WT6 500 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 HORMAD1Q86X24 394 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 TBC1D3Q8IZP1 549 aaPredicted RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 FRMD1Q8N878 549 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 DENND6BQ8NEG7 585 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 OR13C4Q8NGS5 318 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 ZNF398Q8TD17 642 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 NUS1Q96E22 293 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 DTD2Q96FN9 168 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 COQ10AQ96MF6 247 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 FCRL3Q96P31 734 aaPredicted RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 WDR83Q9BRX9 315 aaKnown RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 FAM126AQ9BYI3 521 aaPredicted RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 ZCCHC2Q9C0B9 1178 aaKnown RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 CCDC68Q9H2F9 335 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 SPATA6Q9NWH7 488 aaPredicted RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 PSMC3IPQ9P2W1 217 aaPredicted RBP12.36□□□□□ -0.43
TPM1-209ENST00000558072 INVSQ9Y283 1065 aa12.36□□□□□ -0.43
TPM1-209ENST00000558072 CCDC162PA2VCL2 907 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 H3BMM5 538 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 MAP2K7O14733 419 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 AURKAO14965 403 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 LAMTOR5O43504 91 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 NDUFS2O75306 463 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 NDUFS3O75489 264 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 PRAMEF1O95521 474 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 SEMA4FO95754 770 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 GOT2P00505 430 aaKnown RBP12.35□□□□□ -0.43
TPM1-209ENST00000558072 C1SP09871 688 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 C6P13671 934 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 ZNF7P17097 686 aaPredicted RBP12.35□□□□□ -0.43
TPM1-209ENST00000558072 CCR5P51681 352 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 NUBP1P53384 320 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 NFATC2Q13469 925 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 ITIH4Q14624 930 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 KBTBD12Q3ZCT8 623 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 ZRANB3Q5FWF4 1079 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 LDLRAP1Q5SW96 308 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 TEDDM1Q5T9Z0 273 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 CES3Q6UWW8 571 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 CCDC91Q7Z6B0 441 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 TSPAN33Q86UF1 283 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 PPM1NQ8N819 430 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 SLC44A1Q8WWI5 657 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 AP2M1Q96CW1 435 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 ZNF778Q96MU6 729 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 LENG8Q96PV6 779 aaPredicted RBP12.35□□□□□ -0.43
TPM1-209ENST00000558072 VPS35Q96QK1 796 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 TSSK1BQ9BXA7 367 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 SPATA16Q9BXB7 569 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 ASB8Q9H765 288 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 BPIFA1Q9NP55 256 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 IL26Q9NPH9 171 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 IARS2Q9NSE4 1012 aaKnown RBP12.35□□□□□ -0.43
TPM1-209ENST00000558072 SMOXQ9NWM0 555 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 SENP1Q9P0U3 644 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 SLC2A6Q9UGQ3 507 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 FKBPLQ9UIM3 349 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 GGT7Q9UJ14 662 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 CRLS1Q9UJA2 301 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 FBXO5Q9UKT4 447 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 DMTF1Q9Y222 760 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 ITM2BQ9Y287 266 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 PCDHB1Q9Y5F3 818 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 EML5Q05BV3 1969 aa12.35□□□□□ -0.43
TPM1-209ENST00000558072 A8MX80 341 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 POC1B-GALNT4F8VUJ3 575 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 AXIN1O15169 862 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 MMP20O60882 483 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 RECQL5O94762 991 aaPredicted RBP12.34□□□□□ -0.43
TPM1-209ENST00000558072 ERVK-10P10266 1014 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 PTGER3P43115 390 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 LEPRP48357 1165 aaKnown RBP12.34□□□□□ -0.43
TPM1-209ENST00000558072 CD151P48509 253 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 ADARP55265 1226 aaKnown RBP12.34□□□□□ -0.43
TPM1-209ENST00000558072 TMPRSS15P98073 1019 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 LRRC14Q15048 493 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 TYSND1Q2T9J0 566 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 KRT71Q3SY84 523 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 CEP85LQ5SZL2 805 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 ZNF470Q6ECI4 717 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 ADGRD1Q6QNK2 874 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 Q6ZVL8 140 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 TAS2R42Q7RTR8 314 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 HSD11B1LQ7Z5J1 315 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 PTAR1Q7Z6K3 402 aaPredicted RBP12.34□□□□□ -0.43
TPM1-209ENST00000558072 FAM124AQ86V42 546 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 CILP2Q8IUL8 1156 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 RBFAQ8N0V3 343 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 C2CD4AQ8NCU7 369 aaPredicted RBP12.34□□□□□ -0.43
TPM1-209ENST00000558072 CADM4Q8NFZ8 388 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 RLN3Q8WXF3 142 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 FOXJ1Q92949 421 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 TSPAN17Q96FV3 270 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 DCUN1D1Q96GG9 259 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 VPS39Q96JC1 886 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 ZIM3Q96PE6 472 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 PAFAH2Q99487 392 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 WRAP53Q9BUR4 548 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms