RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 AGBL5Q8NDL9 886 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 OR4D9Q8NGE8 314 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 SCAMP4Q969E2 229 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 AHCYL2Q96HN2 611 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 TAAR9Q96RI9 348 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 ANP32EQ9BTT0 268 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 PCDH9Q9HC56 1237 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 ZNHIT6Q9NWK9 470 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 KCNK4Q9NYG8 393 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 ZNHIT2Q9UHR6 403 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 CD84Q9UIB8 345 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 CHKBQ9Y259 395 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 TMEM98Q9Y2Y6 226 aa13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 ARHGEF17Q96PE2 2063 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-204ENST00000558020 ZNF462Q96JM2 2506 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 J3QKU1 62 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 AGRPO00253 132 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 MFSD11O43934 449 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 STC1P52823 247 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 LIMK2P53671 638 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 DSC2Q02487 901 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 PTPRRQ15256 657 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 TGIF1Q15583 401 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 PYCR3Q53H96 274 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 ODF2Q5BJF6 829 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 NCBP2-AS2Q69YL0 99 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 NAGSQ8N159 534 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 OR10G6Q8NH81 332 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 SH3KBP1Q96B97 665 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 SLC38A3Q99624 504 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 MLPHQ9BV36 600 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 RIOK2Q9BVS4 552 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 TDRD1Q9BXT4 1180 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 MAK16Q9BXY0 300 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 ASPSCR1Q9BZE9 553 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 ZMYND15Q9H091 742 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 DEF6Q9H4E7 631 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 FAM83DQ9H4H8 585 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 STN1Q9H668 368 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 RMI1Q9H9A7 625 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 IFNKQ9P0W0 207 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 VPS18Q9P253 973 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 PIEZO2Q9H5I5 2752 aa13.53□□□□□ -0.24
SNRPA1-204ENST00000558020 IGHV5-10-1A0A0J9YXX1 117 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 C1orf232A0A0U1RR37 186 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 ANKRD66B4E2M5 251 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 STMND1H3BQB6 276 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 PPM1DO15297 605 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 EFSO43281 561 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 CLDN7O95471 211 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 TPM1P09493 284 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 SLC2A4P14672 509 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 PTMSP20962 102 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 HNRNPH3P31942 346 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 CASP14P31944 242 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 ATP1A2P50993 1020 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 C16orf72Q14CZ0 275 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 SLC18A3Q16572 532 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 ATP13A4Q4VNC1 1196 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 MARK2Q7KZI7 788 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 TMPRSS9Q7Z410 1059 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 ZFAND4Q86XD8 727 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 CCDC13Q8IYE1 715 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 AVL9Q8NBF6 648 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 LPCAT1Q8NF37 534 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 HDAC11Q96DB2 347 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 COX14Q96I36 57 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 LYSMD1Q96S90 227 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 NUDT22Q9BRQ3 303 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 PKD2L2Q9NZM6 624 aa13.52□□□□□ -0.25
SNRPA1-204ENST00000558020 IGHV1OR21-1A0A087WYE8 117 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 C9orf172C9J069 976 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 INPP4BO15327 924 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 AKR1B10O60218 316 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 SOD1P00441 154 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 JCHAINP01591 159 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 GYPCP04921 128 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 MAN1A1P33908 653 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 ETV5P41161 510 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 FASLGP48023 281 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 SPINT3P49223 89 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 CCDC70Q6NSX1 233 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 TMEM71Q6P5X7 295 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 ZNF574Q6ZN55 896 aaPredicted RBP13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 RFLNAQ6ZTI6 216 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 DTX1Q86Y01 620 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 RCBTB1Q8NDN9 531 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 OR8K1Q8NGG5 319 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 ARRDC2Q8TBH0 407 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 PATE1Q8WXA2 126 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 FAF2Q96CS3 445 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 CCDC74BQ96LY2 380 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 RNF157Q96PX1 679 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 FAM117AQ9C073 453 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 RAD18Q9NS91 495 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 PCDHGA3Q9Y5H0 932 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 COL6A6A6NMZ7 2263 aa13.51□□□□□ -0.25
SNRPA1-204ENST00000558020 AHCTF1Q8WYP5 2266 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms