RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 HP1BP3Q5SSJ5 553 aaPredicted RBP21.15■□□□□ 0.98
CASC4-204ENST00000557945 HEATR4Q86WZ0 1026 aa21.15■□□□□ 0.98
CASC4-204ENST00000557945 AGGF1Q8N302 714 aaeCLIP21.15■□□□□ 0.986e-8■■■□□ 17.9
CASC4-204ENST00000557945 TRAM1L1Q8N609 369 aa21.15■□□□□ 0.98
CASC4-204ENST00000557945 FAM174AQ8TBP5 190 aa21.15■□□□□ 0.98
CASC4-204ENST00000557945 STAMBPL1Q96FJ0 436 aa21.15■□□□□ 0.98
CASC4-204ENST00000557945 SIGLEC10Q96LC7 697 aa21.15■□□□□ 0.98
CASC4-204ENST00000557945 KIFC1Q9BW19 673 aa21.15■□□□□ 0.98
CASC4-204ENST00000557945 SMOC1Q9H4F8 434 aa21.15■□□□□ 0.98
CASC4-204ENST00000557945 MRM3Q9HC36 420 aaKnown RBP21.15■□□□□ 0.98
CASC4-204ENST00000557945 APPL1Q9UKG1 709 aa21.15■□□□□ 0.98
CASC4-204ENST00000557945 A0A1B0GVT2 93 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 FADS2P1A8MWK0 482 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 PATE3B3GLJ2 98 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 BHMG1C9JSJ3 638 aaPredicted RBP21.14■□□□□ 0.98
CASC4-204ENST00000557945 TLR4O00206 839 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 VILLO15195 856 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 INPP4BO15327 924 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 PRAMEF1O95521 474 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 SOD1P00441 154 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 NMBRP28336 390 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 ARSDP51689 593 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 THOP1P52888 689 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 OVGP1Q12889 678 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 PDIA2Q13087 525 aaKnown RBP21.14■□□□□ 0.98
CASC4-204ENST00000557945 TRIM61Q5EBN2 209 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 ADAMTSL4Q6UY14 1074 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 CENPUQ71F23 418 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 IQCHQ86VS3 1027 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 IFT20Q8IY31 132 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 OR13J1Q8NGT2 312 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 CDKN2AIPNLQ96HQ2 116 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 TBATAQ96M53 351 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 PHOX2BQ99453 314 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 C19orf43Q9BQ61 176 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 SUDS3Q9H7L9 328 aaPredicted RBP21.14■□□□□ 0.98
CASC4-204ENST00000557945 PHPT1Q9NRX4 125 aaPredicted RBP21.14■□□□□ 0.98
CASC4-204ENST00000557945 RIMKLBQ9ULI2 386 aa21.14■□□□□ 0.98
CASC4-204ENST00000557945 USP34Q70CQ2 3546 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 CACNB4O00305 520 aaPredicted RBP21.13■□□□□ 0.97
CASC4-204ENST00000557945 TOR1BO14657 336 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 UGT1A9O60656 530 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 MAGEC1O60732 1142 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 SRP72O76094 671 aaKnown RBP21.13■□□□□ 0.97
CASC4-204ENST00000557945 UGT1A6P19224 532 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 UGT1A1P22309 533 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 UGT1A4P22310 534 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 TEAD1P28347 426 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 MC4RP32245 332 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 UGT1A3P35503 534 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 UGT1A5P35504 534 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 TRIM23P36406 574 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 YPEL5P62699 121 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 PRAMEP78395 509 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 PDE1CQ14123 709 aaPredicted RBP21.13■□□□□ 0.97
CASC4-204ENST00000557945 ARMC3Q5W041 872 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 CCDC25Q86WR0 208 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 OR6P1Q8NGX9 317 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 PEX13Q92968 403 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 HDAC10Q969S8 669 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 FUBP1Q96AE4 644 aaKnown RBP21.13■□□□□ 0.97
CASC4-204ENST00000557945 ZNF669Q96BR6 464 aaPredicted RBP21.13■□□□□ 0.97
CASC4-204ENST00000557945 MFSD3Q96ES6 412 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 EBNA1BP2Q99848 306 aaKnown RBP21.13■□□□□ 0.97
CASC4-204ENST00000557945 TRIM56Q9BRZ2 755 aaKnown RBP21.13■□□□□ 0.97
CASC4-204ENST00000557945 UGT1A7Q9HAW7 530 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 UGT1A10Q9HAW8 530 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 UGT1A8Q9HAW9 530 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 SLC6A14Q9UN76 642 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 SLC30A1Q9Y6M5 507 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 SCN8AQ9UQD0 1980 aa21.13■□□□□ 0.97
CASC4-204ENST00000557945 FAM237BA0A1B0GVD1 139 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 CCDC162PA2VCL2 907 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 PROB1E7EW31 1015 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 GAPDHSO14556 408 aaPredicted RBP21.12■□□□□ 0.97
CASC4-204ENST00000557945 KHNYNO15037 678 aaKnown RBP21.12■□□□□ 0.97
CASC4-204ENST00000557945 ELK3P41970 407 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 XIAPP98170 497 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 CDK3Q00526 305 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 PEX6Q13608 980 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 ITGA9Q13797 1035 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 ATP13A5Q4VNC0 1218 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 ZRANB3Q5FWF4 1079 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 PDPK2PQ6A1A2 396 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 MICALCLQ6ZW33 695 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 ANKMY2Q8IV38 441 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 ZNF398Q8TD17 642 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 HIC2Q96JB3 615 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 TEX101Q9BY14 249 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 ASB8Q9H765 288 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 SAYSD1Q9NPB0 183 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 RRAGDQ9NQL2 400 aaPredicted RBP21.12■□□□□ 0.97
CASC4-204ENST00000557945 FSCN3Q9NQT6 498 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 GDF3Q9NR23 364 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 TREX1Q9NSU2 369 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 ZDHHC18Q9NUE0 388 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 CHMP2BQ9UQN3 213 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 ANKRD6Q9Y2G4 727 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 RPS6KL1Q9Y6S9 549 aa21.12■□□□□ 0.97
CASC4-204ENST00000557945 H7C0S8 307 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms