RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 SDK2Q58EX2 2172 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 TRBV23OR9-2A0A075B6M9 112 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 A0A1B0GTH6 734 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 B4E171 279 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 PYGLP06737 847 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 CSTF2P33240 577 aaKnown RBP eCLIP15.85■□□□□ 0.13
SCFD1-224ENST00000557713 UGT1A3P35503 534 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 TSPAN7P41732 249 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 ATP1A2P50993 1020 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 STC1P52823 247 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 GPLD1P80108 840 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 FILIP1LQ4L180 1135 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.85■□□□□ 0.13
SCFD1-224ENST00000557713 HGSNATQ68CP4 663 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 ALG1LQ6GMV1 187 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 MARK2Q7KZI7 788 aaKnown RBP15.85■□□□□ 0.13
SCFD1-224ENST00000557713 NRSN1Q8IZ57 195 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 SFRP1Q8N474 314 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 CCDC112Q8NEF3 446 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 EXD1Q8NHP7 514 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 BTBD6Q96KE9 485 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 ASPSCR1Q9BZE9 553 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 SPRY4Q9C004 299 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 POLR1EQ9GZS1 481 aaKnown RBP15.85■□□□□ 0.13
SCFD1-224ENST00000557713 SLC39A1Q9NY26 324 aa15.85■□□□□ 0.13
SCFD1-224ENST00000557713 RCOR3Q9P2K3 495 aaPredicted RBP15.85■□□□□ 0.13
SCFD1-224ENST00000557713 SMTNL1A8MU46 457 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 ARHGAP6O43182 974 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 PPFIA2O75334 1257 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 EML2O95834 649 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 PRLP01236 227 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 CD48P09326 243 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 LIFP15018 202 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 CES1P23141 567 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 ARSEP51690 589 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 ITKQ08881 620 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 MMRN1Q13201 1228 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 LRP8Q14114 963 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 NR1I3Q14994 352 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 RAVER1Q8IY67 606 aaKnown RBP15.84■□□□□ 0.13
SCFD1-224ENST00000557713 BMPERQ8N8U9 685 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 SLC37A2Q8TED4 501 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 MAML1Q92585 1016 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 RIOK2Q9BVS4 552 aaKnown RBP15.84■□□□□ 0.13
SCFD1-224ENST00000557713 THAP2Q9H0W7 228 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 SLC25A18Q9H1K4 315 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 IP6K2Q9UHH9 426 aa15.84■□□□□ 0.13
SCFD1-224ENST00000557713 CNOT6Q9ULM6 557 aaKnown RBP15.84■□□□□ 0.13
SCFD1-224ENST00000557713 PCYT1BQ9Y5K3 369 aaPredicted RBP15.84■□□□□ 0.13
SCFD1-224ENST00000557713 UBR5O95071 2799 aaPredicted RBP15.84■□□□□ 0.13
SCFD1-224ENST00000557713 MATN3O15232 486 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 INPP4BO15327 924 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 DNAJC6O75061 913 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 MBD3O95983 291 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 GARSP41250 739 aaKnown RBP15.83■□□□□ 0.12
SCFD1-224ENST00000557713 DSC2Q02487 901 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 GALNT2Q10471 571 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 KRT81Q14533 505 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 PAFAH1B3Q15102 231 aaKnown RBP15.83■□□□□ 0.12
SCFD1-224ENST00000557713 FIGNQ5HY92 759 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 DCAF12Q5T6F0 453 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 BORAQ6PGQ7 559 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 ARHGAP22Q7Z5H3 698 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 ZNF761Q86XN6 746 aaPredicted RBP15.83■□□□□ 0.12
SCFD1-224ENST00000557713 GALNT13Q8IUC8 556 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 CACNA2D3Q8IZS8 1091 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 IL22RA1Q8N6P7 574 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 ARRDC2Q8TBH0 407 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 FATE1Q969F0 183 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 WDR24Q96S15 920 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 SLC38A3Q99624 504 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 TDRD1Q9BXT4 1180 aaKnown RBP15.83■□□□□ 0.12
SCFD1-224ENST00000557713 ADNPQ9H2P0 1102 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 TMEM63CQ9P1W3 806 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 VPS18Q9P253 973 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 AMACRQ9UHK6 382 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 ANAPC7Q9UJX3 599 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 PILRAQ9UKJ1 303 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 CHKBQ9Y259 395 aa15.83■□□□□ 0.12
SCFD1-224ENST00000557713 EFCAB7A8K855 629 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 GOLGA6L22H0YM25 854 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 MFSD11O43934 449 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 RAD1O60671 282 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 MAP3K6O95382 1288 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 CLDN7O95471 211 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 ASMTLO95671 621 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 CYP1A2P05177 515 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 CCNCP24863 283 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 ZNF165P49910 485 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 EPHB1P54762 984 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 RAB15P59190 212 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 ATP13A4Q4VNC1 1196 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 CCDC122Q5T0U0 273 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 ANKS6Q68DC2 871 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 NCBP2-AS2Q69YL0 99 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 WDR74Q6RFH5 385 aaPredicted RBP15.82■□□□□ 0.12
SCFD1-224ENST00000557713 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.82■□□□□ 0.12
SCFD1-224ENST00000557713 OR10G6Q8NH81 332 aa15.82■□□□□ 0.12
SCFD1-224ENST00000557713 AHCYL2Q96HN2 611 aaKnown RBP15.82■□□□□ 0.12
SCFD1-224ENST00000557713 TSGA13Q96PP4 275 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms