RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 FAM71DQ8N9W8 422 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 FAM181AQ8N9Y4 354 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 SCG3Q8WXD2 468 aaKnown RBP12.44□□□□□ -0.42
SLIRP-211ENST00000557623 ADAMTS14Q8WXS8 1223 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 GLMNQ92990 594 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 SCAMP4Q969E2 229 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 HIC2Q96JB3 615 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 TMEM121Q9BTD3 319 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 LRRC61Q9BV99 259 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 RIOK2Q9BVS4 552 aaKnown RBP12.44□□□□□ -0.42
SLIRP-211ENST00000557623 LGR4Q9BXB1 951 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 TLR10Q9BXR5 811 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 TCEAL2Q9H3H9 227 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-211ENST00000557623 KCNF1Q9H3M0 494 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 SLC24A3Q9HC58 644 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 NCKIPSDQ9NZQ3 722 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 NFKBIL1Q9UBC1 381 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-211ENST00000557623 MOSPD1Q9UJG1 213 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 ANGPTL2Q9UKU9 493 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 PNMA8BQ9ULN7 279 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-211ENST00000557623 SHOC2Q9UQ13 582 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 R3HDM2Q9Y2K5 976 aaKnown RBP12.44□□□□□ -0.42
SLIRP-211ENST00000557623 ZKSCAN5Q9Y2L8 839 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 JRKLQ9Y4A0 524 aa12.44□□□□□ -0.42
SLIRP-211ENST00000557623 ZNF106Q9H2Y7 1883 aaKnown RBP12.44□□□□□ -0.42
SLIRP-211ENST00000557623 PRSS38A1L453 326 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 LMO7DNF2Z398 122 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 PSMD3O43242 534 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 LIASO43766 372 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 DKK1O94907 266 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 PIRTP0C851 137 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 GIMD1P0DJR0 217 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 ACP1P24666 158 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 ACTN2P35609 894 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 DCDC1P59894 354 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 SHC2P98077 582 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 ILKQ13418 452 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 C1orf61Q13536 156 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 HENMT1Q5T8I9 393 aaKnown RBP12.43□□□□□ -0.42
SLIRP-211ENST00000557623 ZDHHC20Q5W0Z9 365 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 PDPK2PQ6A1A2 396 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 RAB44Q7Z6P3 723 aaPredicted RBP12.43□□□□□ -0.42
SLIRP-211ENST00000557623 SLCO6A1Q86UG4 719 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 GKN2Q86XP6 184 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 REXO1L1PQ8IX06 675 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 OR1E3Q8WZA6 343 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 PDXPQ96GD0 296 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 APOLD1Q96LR9 279 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 FICDQ9BVA6 458 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 FRMD8Q9BZ67 464 aaPredicted RBP12.43□□□□□ -0.42
SLIRP-211ENST00000557623 CYP4F12Q9HCS2 524 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 FGF22Q9HCT0 170 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 TOR4AQ9NXH8 423 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.43□□□□□ -0.42
SLIRP-211ENST00000557623 FEZ2Q9UHY8 353 aaPredicted RBP12.43□□□□□ -0.42
SLIRP-211ENST00000557623 ZNF148Q9UQR1 794 aa12.43□□□□□ -0.42
SLIRP-211ENST00000557623 KIF5CO60282 957 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 CEP104O60308 925 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 RFPL3O75679 317 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 SOD1P00441 154 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 AGTP01019 485 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 SLC4A1P02730 911 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 CEACAM5P06731 702 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 IVLP07476 585 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 ADRA1AP35348 466 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 HMGCLP35914 325 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 CHRNA4P43681 627 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 RPIAP49247 311 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 ACADVLP49748 655 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 DNAJC3Q13217 504 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 OASLQ15646 514 aaKnown RBP12.42□□□□□ -0.42
SLIRP-211ENST00000557623 CCNG2Q16589 344 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 DEFB133Q30KQ1 61 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 ZNF569Q5MCW4 686 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 DRICH1Q6PGQ1 229 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-211ENST00000557623 RANBP10Q6VN20 620 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 GLT6D1Q7Z4J2 308 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 KLHDC8BQ8IXV7 354 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 TRAM1L1Q8N609 369 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 PNPLA1Q8N8W4 532 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 BLOC1S5Q8TDH9 187 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 C1orf54Q8WWF1 131 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 ATG4AQ8WYN0 398 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 EID2BQ96D98 161 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 RTP4Q96DX8 246 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 PBKQ96KB5 322 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 PLEKHG4BQ96PX9 1271 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 WDR24Q96S15 920 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 AGAP2Q99490 1192 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 GORASP1Q9BQQ3 440 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 ZSCAN5AQ9BUG6 496 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 SPATA16Q9BXB7 569 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 CLPBQ9H078 707 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 MRPL40Q9NQ50 206 aaKnown RBP12.42□□□□□ -0.42
SLIRP-211ENST00000557623 HOMER3Q9NSC5 361 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 SLC17A4Q9Y2C5 497 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 SPO11Q9Y5K1 396 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 CACNA1AO00555 2505 aa12.42□□□□□ -0.42
SLIRP-211ENST00000557623 MYLKQ15746 1914 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 INPP4BO15327 924 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms