RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 NUDT21O43809 227 aaKnown RBP5.87□□□□□ -1.47
VPS33B-207ENST00000557470 RAMP2O60895 175 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 TMCC1O94876 653 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 PIGNO95427 931 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 CPNE6O95741 557 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 GNA14O95837 355 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 IGSF6O95976 241 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 TNFP01375 233 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 PNMA6AP0CW24 399 aaPredicted RBP5.87□□□□□ -1.47
VPS33B-207ENST00000557470 FGF3P11487 239 aaPredicted RBP5.87□□□□□ -1.47
VPS33B-207ENST00000557470 SLC9A1P19634 815 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 UGT1A3P35503 534 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 KRT9P35527 623 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 MMP12P39900 470 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 CCR10P46092 362 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 HTR3AP46098 478 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 GABRB2P47870 512 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 MAPKAPK2P49137 400 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 MAZP56270 477 aaKnown RBP5.87□□□□□ -1.47
VPS33B-207ENST00000557470 STX17P56962 302 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 OR1D5P58170 312 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 ELP6Q0PNE2 266 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 MTM1Q13496 603 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 NCAPHQ15003 741 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 PPP2R5EQ16537 467 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 LONRF2Q1L5Z9 754 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 C2CD6Q53TS8 623 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 FAM72AQ5TYM5 149 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 SPECC1LQ69YQ0 1117 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 FAM72DQ6L9T8 149 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 RWDD4Q6NW29 188 aaKnown RBP5.87□□□□□ -1.47
VPS33B-207ENST00000557470 FOXR2Q6PJQ5 311 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 ZNF438Q7Z4V0 828 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 PIM3Q86V86 326 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 FAM72BQ86X60 149 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 XYLT1Q86Y38 959 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 IRF2BP1Q8IU81 584 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 GALNT12Q8IXK2 581 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 IL22RA1Q8N6P7 574 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 CCDC89Q8N998 374 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 ANKRD42Q8N9B4 389 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 PLA2G15Q8NCC3 412 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 C9orf43Q8TAL5 461 aaPredicted RBP5.87□□□□□ -1.47
VPS33B-207ENST00000557470 FUBP1Q96AE4 644 aaKnown RBP5.87□□□□□ -1.47
VPS33B-207ENST00000557470 TRIM11Q96F44 468 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 CCDC74BQ96LY2 380 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 TAAR9Q96RI9 348 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 YIPF4Q9BSR8 244 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 TTYH3Q9C0H2 523 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 KLC2Q9H0B6 622 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 TMEM168Q9H0V1 697 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 MAGEH1Q9H213 219 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 DPEP2Q9H4A9 486 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 FGF22Q9HCT0 170 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 BRD7Q9NPI1 651 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 MRPL40Q9NQ50 206 aaKnown RBP5.87□□□□□ -1.47
VPS33B-207ENST00000557470 AKAP7Q9P0M2 348 aaPredicted RBP5.87□□□□□ -1.47
VPS33B-207ENST00000557470 APEX2Q9UBZ4 518 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 OR12D3Q9UGF7 316 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 TMEM59LQ9UK28 342 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 HPCAL4Q9UM19 191 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 B3GALT1Q9Y5Z6 326 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 GPC6Q9Y625 555 aaPredicted RBP5.87□□□□□ -1.47
VPS33B-207ENST00000557470 ICE1Q9Y2F5 2266 aa5.87□□□□□ -1.47
VPS33B-207ENST00000557470 CHD5Q8TDI0 1954 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 ELOA3CA0A087WX78 387 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-207ENST00000557470 TSPAN11A1L157 253 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 ELOA3DA6NLF2 546 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-207ENST00000557470 ZNF891A8MT65 544 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-207ENST00000557470 GOLGA8SH3BPF8 625 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 FOXN3O00409 490 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-207ENST00000557470 NKX2-8O15522 239 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 BUB1O43683 1085 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 KDELR3O43731 214 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 DUX1O43812 170 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 LRIG2O94898 1065 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 PRKCGP05129 697 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 PRKAR1AP10644 381 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 XPAP23025 273 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-207ENST00000557470 PON1P27169 355 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 CD1CP29017 333 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 ALDH4A1P30038 563 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 CDH5P33151 784 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-207ENST00000557470 ADRA1BP35368 520 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 PPP1R2P41236 205 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 ZNF165P49910 485 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 LIG3P49916 1009 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 SUOXP51687 545 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 KIAA1024LP59773 190 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 RHOAP61586 193 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 ATP11AP98196 1134 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 NRG1Q02297 640 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-207ENST00000557470 TYRO3Q06418 890 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 RAD51Q06609 339 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 UGP2Q16851 508 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 ELOA3BQ3SY89 546 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 ZSWIM9Q86XI8 627 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 ZNF354CQ86Y25 554 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 CACNA2D3Q8IZS8 1091 aa5.86□□□□□ -1.47
VPS33B-207ENST00000557470 EMC1Q8N766 993 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms