RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 HDAC10Q969S8 669 aa8.34□□□□□ -1.08
CHD8-213ENST00000557364 BTBD10Q9BSF8 475 aa8.34□□□□□ -1.08
CHD8-213ENST00000557364 GBA3Q9H227 469 aa8.34□□□□□ -1.08
CHD8-213ENST00000557364 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.34□□□□□ -1.08
CHD8-213ENST00000557364 NUDT5Q9UKK9 219 aa8.34□□□□□ -1.08
CHD8-213ENST00000557364 STXBP5LQ9Y2K9 1186 aa8.34□□□□□ -1.08
CHD8-213ENST00000557364 SH3GLB1Q9Y371 365 aa8.34□□□□□ -1.08
CHD8-213ENST00000557364 hCG_1818297A0A087WSY0 165 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 AZIN1O14977 448 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 UGT2B17O75795 530 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ADH1BP00325 375 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 RB1P06400 928 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 OLR1P78380 273 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 GALNT3Q14435 633 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 TMEM154Q6P9G4 183 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 RANBP3LQ86VV4 465 aaPredicted RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 ZNF527Q8NB42 609 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 DUSP9Q99956 384 aaKnown RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 DPEP2Q9H4A9 486 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SLC28A2O43868 658 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ATP9AO75110 1047 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SRPRAP08240 638 aaKnown RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 MYL9P24844 172 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 CCKBRP32239 447 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 GYS2P54840 703 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 IRF5Q13568 498 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 FAM189A2Q15884 450 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.33□□□□□ -1.086e-6■■□□□ 12.4
CHD8-213ENST00000557364 HSDL1Q3SXM5 330 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 C9orf64Q5T6V5 341 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ZC3H14Q6PJT7 736 aaKnown RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 CRTC3Q6UUV7 619 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 STK32CQ86UX6 486 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ATCAYQ86WG3 371 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 RTL3Q8N8U3 475 aaKnown RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 NSMCE3Q96MG7 304 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SEPHS2Q99611 448 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 YIPF3Q9GZM5 350 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SRMSQ9H3Y6 488 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 CLDND1Q9NY35 253 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ZMYND8Q9ULU4 1186 aaPredicted RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 ATRNL1Q5VV63 1379 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ERAL1O75616 437 aaKnown RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 CLDN9O95484 217 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 CLPTM1O96005 669 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SMPD1P17405 629 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 CBX5P45973 191 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 CPA2P48052 419 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ARFIP1P53367 373 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 MIIPQ5JXC2 388 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ARMC3Q5W041 872 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ZNF776Q68DI1 518 aaPredicted RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 MED27Q6P2C8 311 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 C5orf34Q96MH7 638 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 AARSD1Q9BTE6 412 aaKnown RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 ACE2Q9BYF1 805 aaPredicted RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 NINJ2Q9NZG7 142 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ERVK-11Q9UQG0 969 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 PCDHB3Q9Y5E6 796 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 LYVE1Q9Y5Y7 322 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 A0A087WXM4 84 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SCN2BO60939 215 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 MATN4O95460 622 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 PCCBP05166 539 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SSTR1P30872 391 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 PTGER3P43115 390 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 LILRA4P59901 499 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 TMEM44Q2T9K0 475 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SNAP47Q5SQN1 464 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SH3RF1Q7Z6J0 888 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 IZUMO1Q8IYV9 350 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 C8orf59Q8N0T1 100 aaPredicted RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 OVCA2Q8WZ82 227 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 DNAJC19Q96DA6 116 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ARHGAP39Q9C0H5 1083 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 KLHL33A6NCF5 533 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SRRM3A6NNA2 597 aaPredicted RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 WASHC1A8K0Z3 465 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 WASH3PC4AMC7 463 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 CLOCKO15516 846 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 ESR1P03372 595 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 MMP8P22894 467 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 FAUP35544 74 aaKnown RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 BRCC3P46736 316 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 GPR33Q49SQ1 333 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SULT1C3Q6IMI6 304 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 MZT2BQ6NZ67 158 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 WASH2PQ6VEQ5 465 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 PRR23BQ6ZRT6 265 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 JAZF1Q86VZ6 243 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 SLC41A1Q8IVJ1 513 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 HOPXQ9BPY8 73 aaPredicted RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 ZSCAN5AQ9BUG6 496 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 MYH9P35579 1960 aaKnown RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 NT5C1B-RDH14C9J2C7 533 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 CHST10O43529 356 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 LAMP2P13473 410 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 BCAP31P51572 246 aa8.33□□□□□ -1.08
CHD8-213ENST00000557364 MKRN4PQ13434 485 aaPredicted RBP8.33□□□□□ -1.08
CHD8-213ENST00000557364 SLC1A5Q15758 541 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms