RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 UPK3BL1B0FP48 263 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 UPK3BL2E5RIL1 263 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 ANHXE9PGG2 379 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 TM9SF1O15321 606 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 SPAG7O75391 227 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 CLDN11O75508 207 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 FAM155BO75949 473 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 STC2O76061 302 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 ZWINTO95229 277 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 PAPLNO95428 1278 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 LATS1O95835 1130 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 OAS1P00973 400 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 HLA-DQB2P05538 268 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 VIMP08670 466 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 GSTP1P09211 210 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 PFKLP17858 780 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 KRT4P19013 534 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 HDCP19113 662 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 CA4P22748 312 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 CORO1AP31146 461 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 SEC24CP53992 1094 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 GNA12Q03113 381 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 PPARDQ03181 441 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 TNK2Q07912 1038 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 DNAJC3Q13217 504 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF177Q13360 481 aaPredicted RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 FRG1Q14331 258 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 CRYMQ14894 314 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 EFTUD2Q15029 972 aaKnown RBP eCLIP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 PCID2Q5JVF3 399 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 ADGRF1Q5T601 910 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 GKAP1Q5VSY0 366 aaPredicted RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 HHATQ5VTY9 493 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 NADSYN1Q6IA69 706 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 CLEC18BQ6UXF7 455 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 MARK2Q7KZI7 788 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 SYT9Q86SS6 491 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 PRPF39Q86UA1 669 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 DENND1CQ8IV53 801 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 CCDC117Q8IWD4 279 aaPredicted RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 KLHDC8BQ8IXV7 354 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 C4orf33Q8N1A6 199 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 CLEC18CQ8NCF0 446 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 PPHLN1Q8NEY8 458 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 IPMKQ8NFU5 416 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 MGARPQ8TDB4 240 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF473Q8WTR7 871 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 CKAP2Q8WWK9 683 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 MRPS31Q92665 395 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 CLDN23Q96B33 292 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 MFSD3Q96ES6 412 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 HMCESQ96FZ2 354 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 MAGEB18Q96M61 343 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF599Q96NL3 588 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 TBL1YQ9BQ87 522 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 FICDQ9BVA6 458 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 SPATA9Q9BWV2 254 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 FSD1LQ9BXM9 530 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 IQCGQ9H095 443 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 SLC25A51Q9H1U9 297 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 NOL6Q9H6R4 1146 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 VPS45Q9NRW7 570 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 SYBUQ9NX95 663 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 LSM7Q9UK45 103 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 IRAK3Q9Y616 596 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 ZFP37Q9Y6Q3 630 aaPredicted RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 RPS6KL1Q9Y6S9 549 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 CACNA1EQ15878 2313 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 CELSR2Q9HCU4 2923 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 A0A1B0GVM2 712 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 SPAARA0A1B0GVQ0 90 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 KANSL1LA0AUZ9 987 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 ILVBLA1L0T0 632 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 TCAF2A6NFQ2 919 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 CXorf49A8MYA2 514 aaPredicted RBP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 FOXO6A8MYZ6 492 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 TRIM49D1C9J1S8 452 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 GFRA2O00451 464 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 TGM5O43548 720 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 KDELR3O43731 214 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 TYROBPO43914 113 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 PRAMEF11O60813 436 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 SIN3BO75182 1162 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 USP12O75317 370 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 PMPCBO75439 489 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 USP1O94782 785 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 FGF19O95750 216 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 C1RP00736 705 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 RHOCP08134 193 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 CNPP09543 421 aaKnown RBP6.85□□□□□ -1.31
SLIRP-204ENST00000555890 SPATA31D3P0C874 917 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 IRF1P10914 325 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 CREB1P16220 341 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 PAMP19021 973 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 CDC25CP30307 473 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 SLC6A4P31645 630 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 CCT5P48643 541 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 OXCT1P55809 520 aa6.85□□□□□ -1.31
SLIRP-204ENST00000555890 CRADDP78560 199 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms