RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 AURKAO14965 403 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 OPA1O60313 960 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 KRT37O76014 449 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 RECQL5O94762 991 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-220ENST00000555634 ERVK-10P10266 1014 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 BPIP17213 487 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 AKT2P31751 481 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 GP5P40197 560 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 ETV3P41162 512 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 GPR1P46091 355 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 SLC12A2P55011 1212 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 CSE1LP55060 971 aaKnown RBP11.15□□□□□ -0.62
SHMT2-220ENST00000555634 GPX6P59796 221 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 SEMG2Q02383 582 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 PTSQ03393 145 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 FZD5Q13467 585 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 NFATC2Q13469 925 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 LRRC14Q15048 493 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 KRT71Q3SY84 523 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 KBTBD12Q3ZCT8 623 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 LDLRAP1Q5SW96 308 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 HSD11B1LQ7Z5J1 315 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 IGDCC3Q8IVU1 814 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 RBFAQ8N0V3 343 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 AGGF1Q8N302 714 aaeCLIP11.15□□□□□ -0.62
SHMT2-220ENST00000555634 DTX3LQ8TDB6 740 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 SNX19Q92543 992 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 FAM131CQ96AQ9 280 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 TOE1Q96GM8 510 aaKnown RBP11.15□□□□□ -0.62
SHMT2-220ENST00000555634 CDKN2AIPNLQ96HQ2 116 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 TBATAQ96M53 351 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 PAFAH2Q99487 392 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 FUT8Q9BYC5 575 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 FAM126AQ9BYI3 521 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-220ENST00000555634 ROPN1BQ9BZX4 212 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-220ENST00000555634 CENPHQ9H3R5 247 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 ASB8Q9H765 288 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 ROPN1Q9HAT0 212 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-220ENST00000555634 PRMT8Q9NR22 394 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-220ENST00000555634 VPS18Q9P253 973 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 SLC2A6Q9UGQ3 507 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 CD84Q9UIB8 345 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 GGT7Q9UJ14 662 aa11.15□□□□□ -0.62
SHMT2-220ENST00000555634 THADAQ6YHU6 1953 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 BDP1A6H8Y1 2624 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 PIKFYVEQ9Y2I7 2098 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 UBA6A0AVT1 1052 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-220ENST00000555634 IGLON5A6NGN9 336 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 FAM159BA6NKW6 160 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 SMIM23A6NLE4 172 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 TNFRSF10AO00220 468 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 FPGTO14772 594 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 ATP8B1O43520 1251 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 FSBPO95073 299 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 PCCBP05166 539 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 ZNF7P17097 686 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-220ENST00000555634 HNRNPA2B1P22626 353 aaKnown RBP11.14□□□□□ -0.63
SHMT2-220ENST00000555634 HOXA6P31267 233 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 SPRP35270 261 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-220ENST00000555634 SLC1A2P43004 574 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 CD151P48509 253 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 CCR5P51681 352 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 TAS2R38P59533 333 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 RPL6Q02878 288 aaKnown RBP11.14□□□□□ -0.63
SHMT2-220ENST00000555634 DPTQ07507 201 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 MSLNQ13421 630 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-220ENST00000555634 GAS6Q14393 721 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 SMAD1Q15797 465 aaKnown RBP11.14□□□□□ -0.63
SHMT2-220ENST00000555634 CEP85LQ5SZL2 805 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 KIAA0895LQ68EN5 471 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 Q6ZVL8 140 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 STRA8Q7Z7C7 330 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 GALNT7Q86SF2 657 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 CILP2Q8IUL8 1156 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 CNTN4Q8IWV2 1026 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 GPR150Q8NGU9 434 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 ZNF398Q8TD17 642 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 ASB12Q8WXK4 309 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 FOXJ1Q92949 421 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 MTBPQ96DY7 904 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 TSPAN17Q96FV3 270 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 COQ10AQ96MF6 247 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 ZNF778Q96MU6 729 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 TSNARE1Q96NA8 513 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 FCRL3Q96P31 734 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-220ENST00000555634 VPS35Q96QK1 796 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 COPS8Q99627 209 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 WDR83Q9BRX9 315 aaKnown RBP11.14□□□□□ -0.63
SHMT2-220ENST00000555634 RIOK2Q9BVS4 552 aaKnown RBP11.14□□□□□ -0.63
SHMT2-220ENST00000555634 SLC17A9Q9BYT1 436 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 CLPBQ9H078 707 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 WDR26Q9H7D7 661 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 PHPT1Q9NRX4 125 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-220ENST00000555634 SMOXQ9NWM0 555 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 MOCS1Q9NZB8 636 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 RAPGEFL1Q9UHV5 662 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 RABGEF1Q9UJ41 708 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 GNPTGQ9UJJ9 305 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 DMTF1Q9Y222 760 aa11.14□□□□□ -0.63
SHMT2-220ENST00000555634 COQ6Q9Y2Z9 468 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms