RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 CKAP5Q14008 2032 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 HMGB1P1B2RPK0 211 aaPredicted RBP10.16□□□□□ -0.78
SRP54-208ENST00000555557 OR1I1O60431 355 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 KRT37O76014 449 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 KRT38O76015 456 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 DNTTP04053 509 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 NDUFV2P19404 249 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 PMLP29590 882 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 SPRP35270 261 aaPredicted RBP10.16□□□□□ -0.78
SRP54-208ENST00000555557 GMPRP36959 345 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 LEPRP48357 1165 aaKnown RBP10.16□□□□□ -0.78
SRP54-208ENST00000555557 LIMK2P53671 638 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 GYS2P54840 703 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 ELP6Q0PNE2 266 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 TERF2Q15554 542 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 TMEM31Q5JXX7 168 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 KIAA1324Q6UXG2 1013 aaKnown RBP10.16□□□□□ -0.78
SRP54-208ENST00000555557 FAM124AQ86V42 546 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 DCLK2Q8N568 766 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 GPR150Q8NGU9 434 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 HMGB4Q8WW32 186 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 SHDQ96IW2 340 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 VPS39Q96JC1 886 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 NDNQ99608 321 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 CAB39LQ9H9S4 337 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 PKD2L2Q9NZM6 624 aa10.16□□□□□ -0.78
SRP54-208ENST00000555557 MRPS17Q9Y2R5 130 aaKnown RBP10.16□□□□□ -0.78
SRP54-208ENST00000555557 PRR23AA6NEV1 266 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 POLR3GO15318 223 aaPredicted RBP10.15□□□□□ -0.78
SRP54-208ENST00000555557 SPAG7O75391 227 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 PCDH8O95206 1070 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 MT-ND3P03897 115 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 C6P13671 934 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 GABRG2P18507 467 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 KRT4P19013 534 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 CD151P48509 253 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 SERPINB9P50453 376 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 CSE1LP55060 971 aaKnown RBP10.15□□□□□ -0.78
SRP54-208ENST00000555557 CACNG1Q06432 222 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 NFATC2Q13469 925 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 HSF5Q4G112 596 aaPredicted RBP10.15□□□□□ -0.78
SRP54-208ENST00000555557 ATP13A5Q4VNC0 1218 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 RBM20Q5T481 1227 aaKnown RBP10.15□□□□□ -0.78
SRP54-208ENST00000555557 LGSNQ5TDP6 509 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 KIAA0408Q6ZU52 694 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 TECPR1Q7Z6L1 1165 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 CMC1Q7Z7K0 106 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 SDCCAG8Q86SQ7 713 aaPredicted RBP10.15□□□□□ -0.78
SRP54-208ENST00000555557 UBALD2Q8IYN6 164 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 KRT222Q8N1A0 295 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 PELI3Q8N2H9 469 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 GPATCH11Q8N954 259 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 OR14C36Q8NHC7 312 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 ZNF398Q8TD17 642 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 RIOK2Q9BVS4 552 aaKnown RBP10.15□□□□□ -0.78
SRP54-208ENST00000555557 RHOJQ9H4E5 214 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 FAM83DQ9H4H8 585 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 TBC1D17Q9HA65 648 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 NSMCE4AQ9NXX6 385 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 APPL1Q9UKG1 709 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 SLC39A10Q9ULF5 831 aa10.15□□□□□ -0.78
SRP54-208ENST00000555557 UBA6A0AVT1 1052 aaPredicted RBP10.15□□□□□ -0.79
SRP54-208ENST00000555557 FAM47DPA6NHR8 397 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 TPP1O14773 563 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 LZTS3O60299 673 aaPredicted RBP10.15□□□□□ -0.79
SRP54-208ENST00000555557 RFPL1O75677 317 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 RECQL5O94762 991 aaPredicted RBP10.15□□□□□ -0.79
SRP54-208ENST00000555557 ALDOAP04075 364 aaKnown RBP10.15□□□□□ -0.79
SRP54-208ENST00000555557 PYGBP11216 843 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 ATP5DP30049 168 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 LRRC32Q14392 662 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 TYSND1Q2T9J0 566 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 TMEM52BQ4KMG9 183 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 PPM1JQ5JR12 505 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 SEL1L3Q68CR1 1132 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 SNX20Q7Z614 316 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 SLC41A1Q8IVJ1 513 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 LMNTD2Q8IXW0 634 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 PGBD3Q8N328 593 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 GABPB2Q8TAK5 448 aaPredicted RBP10.15□□□□□ -0.79
SRP54-208ENST00000555557 CXorf40AQ8TE69 158 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 RAB7BQ96AH8 199 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 SGSM3Q96HU1 749 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 COQ10AQ96MF6 247 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 BOCQ9BWV1 1114 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 SPATA16Q9BXB7 569 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 OSBPL6Q9BZF3 934 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 STMN4Q9H169 189 aaPredicted RBP10.15□□□□□ -0.79
SRP54-208ENST00000555557 FBRSQ9HAH7 460 aa10.15□□□□□ -0.79
SRP54-208ENST00000555557 FAM95CA0A1B0GW59 222 aa10.14□□□□□ -0.79
SRP54-208ENST00000555557 IGLON5A6NGN9 336 aa10.14□□□□□ -0.79
SRP54-208ENST00000555557 H0Y858 1186 aa10.14□□□□□ -0.79
SRP54-208ENST00000555557 WNT9AO14904 365 aa10.14□□□□□ -0.79
SRP54-208ENST00000555557 NDUFS3O75489 264 aa10.14□□□□□ -0.79
SRP54-208ENST00000555557 TOP3BO95985 862 aaKnown RBP10.14□□□□□ -0.79
SRP54-208ENST00000555557 DCNP07585 359 aaKnown RBP10.14□□□□□ -0.79
SRP54-208ENST00000555557 ACADMP11310 421 aa10.14□□□□□ -0.79
SRP54-208ENST00000555557 BRAFP15056 766 aa10.14□□□□□ -0.79
SRP54-208ENST00000555557 ITGALP20701 1170 aa10.14□□□□□ -0.79
SRP54-208ENST00000555557 OGNP20774 298 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms