RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ADAMTSL4Q6UY14 1074 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 NRSN1Q8IZ57 195 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 OR56A4Q8NGH8 313 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 COX14Q96I36 57 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 CNDP2Q96KP4 475 aaKnown RBP12.29□□□□□ -0.44
SYNE2-214ENST00000554928 OSBPL9Q96SU4 736 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 TBL1YQ9BQ87 522 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 FSD1LQ9BXM9 530 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 FAM83DQ9H4H8 585 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 ETNK1Q9HBU6 452 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 CYP4F12Q9HCS2 524 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 PKD2L2Q9NZM6 624 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 MOSPD1Q9UJG1 213 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 SNX12Q9UMY4 172 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 ARL5AQ9Y689 179 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 PCNX2A6NKB5 2137 aa12.29□□□□□ -0.44
SYNE2-214ENST00000554928 ARID1BQ8NFD5 2236 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-214ENST00000554928 PRSS38A1L453 326 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 CCL22O00626 93 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 GAPDHSO14556 408 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-214ENST00000554928 RASGRP1O95267 797 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 LDOC1O95751 146 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-214ENST00000554928 FGF1P05230 155 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 ADRB1P08588 477 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 HTR1BP28222 390 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 TEAD1P28347 426 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 GNG11P61952 73 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 PRPSAP1Q14558 356 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 P3H1Q32P28 736 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 KHDC1Q4VXA5 237 aaKnown RBP12.28□□□□□ -0.44
SYNE2-214ENST00000554928 CCDC157Q569K6 752 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 CCDC70Q6NSX1 233 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 DRICH1Q6PGQ1 229 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-214ENST00000554928 MARK2Q7KZI7 788 aaKnown RBP12.28□□□□□ -0.44
SYNE2-214ENST00000554928 ERMP1Q7Z2K6 904 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 GLT6D1Q7Z4J2 308 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 GLRX5Q86SX6 157 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 NLRP8Q86W28 1048 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 MARCH9Q86YJ5 346 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 OR4C6Q8NH72 309 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 CCHCR1Q8TD31 782 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 PBKQ96KB5 322 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 FERMT1Q9BQL6 677 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 FRMD8P1Q9BZ68 369 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-214ENST00000554928 TMEM168Q9H0V1 697 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 CARS2Q9HA77 564 aaKnown RBP12.28□□□□□ -0.44
SYNE2-214ENST00000554928 PHPT1Q9NRX4 125 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-214ENST00000554928 IL17CQ9P0M4 197 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 FTSJ1Q9UET6 329 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 SUFUQ9UMX1 484 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 WASF3Q9UPY6 502 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 AAR2Q9Y312 384 aaKnown RBP12.28□□□□□ -0.44
SYNE2-214ENST00000554928 PRKAB1Q9Y478 270 aa12.28□□□□□ -0.44
SYNE2-214ENST00000554928 TDRD6O60522 2096 aaKnown RBP12.28□□□□□ -0.44
SYNE2-214ENST00000554928 LRP4O75096 1905 aa12.27□□□□□ -0.44
SYNE2-214ENST00000554928 H3BM21 787 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 YY2O15391 372 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 MTX2O75431 263 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 AP2A1O95782 977 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 PMLP29590 882 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 STIP1P31948 543 aaKnown RBP12.27□□□□□ -0.45
SYNE2-214ENST00000554928 HMGCLP35914 325 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 GNPDA1P46926 289 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 ACADVLP49748 655 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 FOXC1Q12948 553 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 TRIP13Q15645 432 aaPredicted RBP12.27□□□□□ -0.45
SYNE2-214ENST00000554928 CHRNA6Q15825 494 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 NRROSQ86YC3 692 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 OR13C4Q8NGS5 318 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 CCDC97Q96F63 343 aaPredicted RBP12.27□□□□□ -0.45
SYNE2-214ENST00000554928 HIC2Q96JB3 615 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 APOLD1Q96LR9 279 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 SPATA16Q9BXB7 569 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 SLC13A1Q9BZW2 595 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 IL26Q9NPH9 171 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 RAB6BQ9NRW1 208 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 SPASTQ9UBP0 616 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 TTC7AQ9ULT0 858 aaPredicted RBP12.27□□□□□ -0.45
SYNE2-214ENST00000554928 DRG1Q9Y295 367 aaKnown RBP12.27□□□□□ -0.45
SYNE2-214ENST00000554928 SLC17A4Q9Y2C5 497 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 DGKBQ9Y6T7 804 aa12.27□□□□□ -0.45
SYNE2-214ENST00000554928 TCRBV7S3A2A0A539 114 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 CCDC78A2IDD5 438 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 RGSL1A5PLK6 1076 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 TNFRSF10CO14798 259 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 TNFSF14O43557 240 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 HYAL3O43820 417 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-214ENST00000554928 UGT1A9O60656 530 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 DKK1O94907 266 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 TNFP01375 233 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 UGT1A6P19224 532 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 UGT1A1P22309 533 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 UGT1A4P22310 534 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 AK4P27144 223 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-214ENST00000554928 UGT1A3P35503 534 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 UGT1A5P35504 534 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 TERF1P54274 439 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 DCDC1P59894 354 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 TMPRSS15P98073 1019 aa12.26□□□□□ -0.45
SYNE2-214ENST00000554928 SEMA5AQ13591 1074 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms