RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 ANP32AP39687 249 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 ACTR1BP42025 376 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 ACTR1AP61163 376 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 NIPAL4Q0D2K0 466 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 SLC10A2Q12908 348 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 DPYSL3Q14195 570 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 PAFAH1B3Q15102 231 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 TBR1Q16650 682 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 NCBP2-AS2Q69YL0 99 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 DOK6Q6PKX4 331 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 ZNF765Q7L2R6 523 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 NSMCE1Q8WV22 266 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 FATE1Q969F0 183 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 NKD1Q969G9 470 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 TSGA13Q96PP4 275 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 OR2M4Q96R27 311 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 TAAR9Q96RI9 348 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 SLC12A9Q9BXP2 914 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 PDP2Q9P2J9 529 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 RCOR3Q9P2K3 495 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 ANAPC7Q9UJX3 599 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 NENFQ9UMX5 172 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 CHKBQ9Y259 395 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 PCDHGA3Q9Y5H0 932 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 B3GALT1Q9Y5Z6 326 aa12.15□□□□□ -0.46
MTHFD1-207ENST00000554677 PTPN13Q12923 2485 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 A0A1W2PQJ5 194 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 CYSRT1A8MQ03 144 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 SLC28A2O43868 658 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 DNAJC6O75061 913 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 CLDN7O95471 211 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 FAM87AP0C7U9 286 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 THRAP10827 490 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 ZNF30P17039 623 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 MPSTP25325 297 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 FASLGP48023 281 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 NFATC3Q12968 1075 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 TRA2AQ13595 282 aaKnown RBP eCLIP12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 CLCA4Q14CN2 919 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 ANKRD20A8PQ5CZ79 823 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 ZNF761Q86XN6 746 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 NRSN1Q8IZ57 195 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 SFRP1Q8N474 314 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 PQLC3Q8N755 202 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 JPH3Q8WXH2 748 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 LYSMD1Q96S90 227 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 RIOK2Q9BVS4 552 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 TDRD1Q9BXT4 1180 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 SPRY4Q9C004 299 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 POLR1EQ9GZS1 481 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 RBM22Q9NW64 420 aaKnown RBP eCLIP12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 OCIAD1Q9NX40 245 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 PCDHB11Q9Y5F2 797 aa12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 BZW2Q9Y6E2 419 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 OAS3Q9Y6K5 1087 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-207ENST00000554677 STMND1H3BQB6 276 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 MYO1FO00160 1098 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 INPP4BO15327 924 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 WISP1O95388 367 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 SERPINC1P01008 464 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 SERPING1P05155 500 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 HLA-DQB2P05538 268 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 MMP2P08253 660 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 CES1P23141 567 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 CCNCP24863 283 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 TAS2R40P59535 323 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 FANCCQ00597 558 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 NFKB2Q00653 900 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 ITKQ08881 620 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 KRT81Q14533 505 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 TDRD12Q587J7 1177 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 CCDC122Q5T0U0 273 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 FAM182AQ5T1J6 154 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 TMEM164Q5U3C3 297 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 TMEM71Q6P5X7 295 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 ALKBH5Q6P6C2 394 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 MARK2Q7KZI7 788 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 ARHGAP22Q7Z5H3 698 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 RAVER1Q8IY67 606 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 BMPERQ8N8U9 685 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 EXD1Q8NHP7 514 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 SLC37A2Q8TED4 501 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 ART4Q93070 314 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 FAF2Q96CS3 445 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 EID2BQ96D98 161 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 CDH19Q9H159 772 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 KCNK4Q9NYG8 393 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 AKAP7Q9P0M2 348 aaPredicted RBP12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 CAPN11Q9UMQ6 739 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 PRKAB1Q9Y478 270 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 UBR5O95071 2799 aaPredicted RBP12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 FLNCQ14315 2725 aa12.13□□□□□ -0.47
MTHFD1-207ENST00000554677 MAST4O15021 2626 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 SEC16AO15027 2179 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 A6NCN8 305 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 FADS2P1A8MWK0 482 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 TERTO14746 1132 aaKnown RBP12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 ZW10O43264 779 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms