RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 STXBP5LQ9Y2K9 1186 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 KHDRBS3O75525 346 aaKnown RBP13.92□□□□□ -0.18
VTI1B-204ENST00000554659 TCEA3O75764 348 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 ITGA3P26006 1051 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 GALK1P51570 392 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 FCHO2Q0JRZ9 810 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 MED22Q15528 200 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 TSC22D1Q15714 1073 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 PPM1JQ5JR12 505 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 REP15Q6BDI9 236 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 LENG8Q96PV6 779 aaPredicted RBP13.92□□□□□ -0.18
VTI1B-204ENST00000554659 COPS8Q99627 209 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 C12orf65Q9H3J6 166 aaKnown RBP13.92□□□□□ -0.18
VTI1B-204ENST00000554659 IL18R1Q13478 541 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.91□□□□□ -0.18
VTI1B-204ENST00000554659 NETO2Q8NC67 525 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 GPR156Q8NFN8 814 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 GRIN3AQ8TCU5 1115 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 ROPN1LQ96C74 230 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 PCDHB1Q9Y5F3 818 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 NPEPPSL1A6NEC2 478 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 FOXO6A8MYZ6 492 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 GJB1P08034 283 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 CYP4B1P13584 511 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 ZNF24P17028 368 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 CHRNB2P17787 502 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 TGFBR2P37173 567 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 GNPDA1P46926 289 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 SEMA5AQ13591 1074 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 CNSTQ6PJW8 725 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 CRTC3Q6UUV7 619 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 PTCHD4Q6ZW05 846 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 FAM220AQ7Z4H9 259 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 TEX47Q8TBZ9 253 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 RACGAP1Q9H0H5 632 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 BRD9Q9H8M2 597 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 CHRAC1Q9NRG0 131 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 TUBA8Q9NY65 449 aaPredicted RBP13.91□□□□□ -0.18
VTI1B-204ENST00000554659 SLC22A2O15244 555 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 AMHP03971 560 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 MYL9P24844 172 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 ATN1P54259 1190 aaPredicted RBP13.91□□□□□ -0.18
VTI1B-204ENST00000554659 ACAP2Q15057 778 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 NOMO2Q5JPE7 1267 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 ANKS1BQ7Z6G8 1248 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 CENPNQ96H22 339 aaPredicted RBP13.91□□□□□ -0.18
VTI1B-204ENST00000554659 AGO3Q9H9G7 860 aaKnown RBP13.91□□□□□ -0.18
VTI1B-204ENST00000554659 IFT80Q9P2H3 777 aaPredicted RBP13.91□□□□□ -0.18
VTI1B-204ENST00000554659 PCDHGA4Q9Y5G9 962 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 TRAV19A0A0A6YYK7 116 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 SLC9A3R1O14745 358 aaPredicted RBP13.91□□□□□ -0.18
VTI1B-204ENST00000554659 LSM1O15116 133 aaKnown RBP13.91□□□□□ -0.18
VTI1B-204ENST00000554659 GRM3Q14832 879 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 VWA5B1Q5TIE3 1220 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 TAPT1Q6NXT6 567 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 NEK5Q6P3R8 708 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 CXXC5Q7LFL8 322 aaKnown RBP13.91□□□□□ -0.18
VTI1B-204ENST00000554659 HTRA1Q92743 480 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 SLC35C2Q9NQQ7 365 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 DMAC2Q9NW81 257 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 FAM92AA1XBS5 289 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 PLK4O00444 970 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 LRATO95237 230 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 CST3P01034 146 aaPredicted RBP13.91□□□□□ -0.18
VTI1B-204ENST00000554659 PKMP14618 531 aaKnown RBP13.91□□□□□ -0.18
VTI1B-204ENST00000554659 CCNCP24863 283 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 RPS9P46781 194 aaKnown RBP13.91□□□□□ -0.18
VTI1B-204ENST00000554659 IDH3AP50213 366 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 BCAP31P51572 246 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 ZNHIT3Q15649 155 aaPredicted RBP13.91□□□□□ -0.18
VTI1B-204ENST00000554659 PARP15Q460N3 678 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 GPAT3Q53EU6 434 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 COL26A1Q96A83 441 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 KLHL5Q96PQ7 755 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 MAF1Q9H063 256 aa13.91□□□□□ -0.18
VTI1B-204ENST00000554659 SLC15A5A6NIM6 579 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 LOC110117498-PIK3R3F6TDL0 507 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 THRBP10828 461 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 PEX2P28328 305 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 MAPK9P45984 424 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 ASTE1Q2TB18 679 aaPredicted RBP13.9□□□□□ -0.18
VTI1B-204ENST00000554659 RASAL3Q86YV0 1011 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 OR4A15Q8NGL6 344 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 HM13Q8TCT9 377 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 CXorf40AQ8TE69 158 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 SUSD6Q92537 303 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 NIFKQ9BYG3 293 aaKnown RBP13.9□□□□□ -0.18
VTI1B-204ENST00000554659 SIX2Q9NPC8 291 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 EIF2B3Q9NR50 452 aaKnown RBP13.9□□□□□ -0.18
VTI1B-204ENST00000554659 RBMX2Q9Y388 322 aaKnown RBP13.9□□□□□ -0.18
VTI1B-204ENST00000554659 PCDHAC2Q9Y5I4 1007 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 TPD52L2O43399 206 aaKnown RBP13.9□□□□□ -0.18
VTI1B-204ENST00000554659 RGS10O43665 173 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 TULP3O75386 442 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 BMP7P18075 431 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 ZDHHC24Q6UX98 284 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 PIH1D2Q8WWB5 315 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 EXOC2Q96KP1 924 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 NXF3Q9H4D5 531 aaKnown RBP13.9□□□□□ -0.18
VTI1B-204ENST00000554659 NR2E1Q9Y466 385 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms