RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 FAM153AQ9UHL3 310 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 RSPH14Q9UHP6 348 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 ZMIZ1Q9ULJ6 1067 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 SUFUQ9UMX1 484 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 TMEM98Q9Y2Y6 226 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 ZNF711Q9Y462 761 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 GPSM3Q9Y4H4 160 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 AK5Q9Y6K8 562 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 U3KQA8 63 aa10.62□□□□□ -0.71
SHMT2-213ENST00000554600 COL27A1Q8IZC6 1860 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-213ENST00000554600 ZNF106Q9H2Y7 1883 aaKnown RBP10.61□□□□□ -0.71
SHMT2-213ENST00000554600 MIF4GDA9UHW6 222 aaKnown RBP10.61□□□□□ -0.71
SHMT2-213ENST00000554600 KCNN4O15554 427 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 KRT86O43790 486 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 NRDCO43847 1150 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 CEACAM5P06731 702 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 GP1BAP07359 652 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 RBP3P10745 1247 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 TEAD1P28347 426 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 CD68P34810 354 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-213ENST00000554600 PTPN7P35236 360 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 SPINT3P49223 89 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 WNT3AP56704 352 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 CYP4F3Q08477 520 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 ILF3Q12906 894 aaKnown RBP eCLIP10.61□□□□□ -0.71
SHMT2-213ENST00000554600 XRCC4Q13426 336 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 BIRC2Q13490 618 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 SLC14A2Q15849 920 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 PERM1Q5SV97 790 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 ITPRIPL1Q6GPH6 555 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 ADAMTSL4Q6UY14 1074 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 ARL10Q8N8L6 244 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 CCDC112Q8NEF3 446 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 CCL4L1Q8NHW4 92 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 TRIB3Q96RU7 358 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 LYSMD1Q96S90 227 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 SPATA16Q9BXB7 569 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 FSD1LQ9BXM9 530 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 GSDMCQ9BYG8 508 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 FRMD8Q9BZ67 464 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-213ENST00000554600 TSGA10Q9BZW7 698 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 TRHDEQ9UKU6 1024 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 EFR3BQ9Y2G0 817 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 ADGRG1Q9Y653 693 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 SPEGQ15772 3267 aa10.61□□□□□ -0.71
SHMT2-213ENST00000554600 ADAMTS20P59510 1910 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 EME2A4GXA9 379 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-213ENST00000554600 ARHGAP6O43182 974 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 CSO75390 466 aaKnown RBP10.6□□□□□ -0.71
SHMT2-213ENST00000554600 ATP1A1P05023 1023 aaKnown RBP10.6□□□□□ -0.71
SHMT2-213ENST00000554600 AK4P27144 223 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-213ENST00000554600 MPP3Q13368 585 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 PRPSAP1Q14558 356 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 SLC30A9Q6PML9 568 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 GALNT13Q8IUC8 556 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 RNF10Q8N5U6 811 aaKnown RBP10.6□□□□□ -0.71
SHMT2-213ENST00000554600 KDF1Q8NAX2 398 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-213ENST00000554600 PTCD2Q8WV60 388 aaKnown RBP10.6□□□□□ -0.71
SHMT2-213ENST00000554600 CCDC74AQ96AQ1 378 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 NXPE2Q96DL1 559 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 OXNAD1Q96HP4 312 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-213ENST00000554600 DEPDC7Q96QD5 511 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 OR2M4Q96R27 311 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 FCRL5Q96RD9 977 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 SRPK1Q96SB4 655 aaKnown RBP10.6□□□□□ -0.71
SHMT2-213ENST00000554600 CCDC3Q9BQI4 270 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 CDH19Q9H159 772 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 MAGEE1Q9HCI5 957 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 ZNHIT2Q9UHR6 403 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 CAPN6Q9Y6Q1 641 aa10.6□□□□□ -0.71
SHMT2-213ENST00000554600 FLNBO75369 2602 aaKnown RBP10.6□□□□□ -0.71
SHMT2-213ENST00000554600 RGSL1A5PLK6 1076 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 FADS2P1A8MWK0 482 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 ANXA9O76027 345 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 SOD1P00441 154 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 FUCA1P04066 466 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 IVLP07476 585 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 CCDC175P0C221 793 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 ADCY8P40145 1251 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 ACTR1BP42025 376 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 CHRNA4P43681 627 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 PPM1FP49593 454 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-213ENST00000554600 GEMP55040 296 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 ACTR1AP61163 376 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 CTBSQ01459 385 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 CAMK2BQ13554 666 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 SPIDRQ14159 915 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 SIRPB2Q5JXA9 342 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 ZNF569Q5MCW4 686 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 ANKRD20A2Q5SQ80 823 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 HENMT1Q5T8I9 393 aaKnown RBP10.59□□□□□ -0.71
SHMT2-213ENST00000554600 SEL1L2Q5TEA6 688 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 ANKRD20A1Q5TYW2 823 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 ANKRD20A3Q5VUR7 823 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 KDELC1Q6UW63 502 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 RBM44Q6ZP01 1051 aaKnown RBP10.59□□□□□ -0.71
SHMT2-213ENST00000554600 NLRP8Q86W28 1048 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 SFTPA2Q8IWL1 248 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 RAVER1Q8IY67 606 aaKnown RBP10.59□□□□□ -0.71
SHMT2-213ENST00000554600 Q8N9G6 341 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms