RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 POLR1CO15160 346 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 PJA2O43164 708 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 SNAPINO95295 136 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 TRIM16O95361 564 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 PLEKHA8P1O95397 391 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 FAM107AO95990 144 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 C1RP00736 705 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 OPN1MWP04001 364 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 POLR2MP0CAP2 368 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 THEGLP0DJG4 465 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 OPN1MW2P0DN77 364 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 OPN1MW3P0DN78 364 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 ZNF12P17014 697 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 TFEBP19484 476 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 ITGAXP20702 1163 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 RPS6KB1P23443 525 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 PKLRP30613 574 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 KRT2P35908 639 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 PTPN9P43378 593 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 HTR3AP46098 478 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 HNRNPFP52597 415 aaKnown RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 P2RX3P56373 397 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 TSPAN5P62079 268 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 SPAG1Q07617 926 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 AIMP1Q12904 312 aaKnown RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 CDC16Q13042 620 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 CUL2Q13617 745 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 DMC1Q14565 340 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 RFTN1Q14699 578 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 TTF1Q15361 905 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 SF3B4Q15427 424 aaKnown RBP eCLIP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 PHKG1Q16816 387 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 FAM110CQ1W6H9 321 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 TMEM266Q2M3C6 531 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 TDRD12Q587J7 1177 aaKnown RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 FAM76BQ5HYJ3 339 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 SPOPLQ6IQ16 392 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 ARMC6Q6NXE6 501 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 AAGABQ6PD74 315 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 Q6ZVL8 140 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 ZNF572Q7Z3I7 529 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 DNAAF5Q86Y56 855 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 TICAM1Q8IUC6 712 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 EPHX4Q8IUS5 362 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 WDR49Q8IV35 697 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 MB21D2Q8IYB1 491 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 LRRC34Q8IZ02 419 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 ZNF619Q8N2I2 560 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 LIX1Q8N485 282 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 CPSF7Q8N684 471 aaKnown RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 ATP6V0D2Q8N8Y2 350 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 TTC8Q8TAM2 541 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 PHOSPHO2Q8TCD6 241 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 SLC26A7Q8TE54 656 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 SSH3Q8TE77 659 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 DENND1AQ8TEH3 1009 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 CCT6BQ92526 530 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 BADQ92934 168 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 RNF31Q96EP0 1072 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 RMND5BQ96G75 393 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 TMEM68Q96MH6 324 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 CFAP57Q96MR6 1250 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 ZNF560Q96MR9 790 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 WACQ9BTA9 647 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 PACSIN1Q9BY11 444 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 KCNN2Q9H2S1 579 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 OR51B5Q9H339 312 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 THAP9Q9H5L6 903 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 TFB2MQ9H5Q4 396 aaKnown RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 TRPV4Q9HBA0 871 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 MOV10Q9HCE1 1003 aaKnown RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 GLRX2Q9NS18 164 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 INTS9Q9NV88 658 aaKnown RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 NKIRAS2Q9NYR9 191 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 STMN3Q9NZ72 180 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 TBC1D14Q9P2M4 693 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 ZNF70Q9UC06 446 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 GIMAP2Q9UG22 337 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.46□□□□□ -1.7
ATXN3-227ENST00000554491 LRCH1Q9Y2L9 728 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 PCDHGA3Q9Y5H0 932 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 DGKBQ9Y6T7 804 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 CHD9Q3L8U1 2897 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 USP34Q70CQ2 3546 aa4.46□□□□□ -1.7
ATXN3-227ENST00000554491 A0A1B0GTW7 788 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 OR6C74A6NCV1 312 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 SMCO2A6NFE2 343 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 C5orf60A6NFR6 353 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 LRRIQ4A6NIV6 560 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 TARM1B6A8C7 271 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 DNM1LO00429 736 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 AREL1O15033 823 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 RIPK2O43353 540 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 SOCS5O75159 536 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 TIPRLO75663 272 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 ATP5HO75947 161 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 DNAJB5O75953 348 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 PLGP00747 810 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 PABPC4LP0CB38 370 aaKnown RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 GAP43P17677 238 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms