RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TMEM135Q86UB9 458 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 AGGF1Q8N302 714 aaeCLIP14.48□□□□□ -0.09
SHMT2-208ENST00000553868 PHTF2Q8N3S3 785 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 RIBC1Q8N443 379 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-208ENST00000553868 GABPB2Q8TAK5 448 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-208ENST00000553868 FBF1Q8TES7 1133 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 CYB5D2Q8WUJ1 264 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 CDKL2Q92772 493 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 NXPE2Q96DL1 559 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 MYO19Q96H55 970 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 MRGPRX3Q96LB0 322 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 ZNF641Q96N77 438 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-208ENST00000553868 TRIB3Q96RU7 358 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 CDC6Q99741 560 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 KIFC1Q9BW19 673 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 SLC6A17Q9H1V8 727 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 ACSS3Q9H6R3 686 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 PIH1D1Q9NWS0 290 aaKnown RBP14.48□□□□□ -0.09
SHMT2-208ENST00000553868 HACD3Q9P035 362 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 SLCO3A1Q9UIG8 710 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 CHKBQ9Y259 395 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 TCAF1Q9Y4C2 921 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 AK5Q9Y6K8 562 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 RPS6KL1Q9Y6S9 549 aa14.48□□□□□ -0.09
SHMT2-208ENST00000553868 TCRBV9S1A1TA0A576 114 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 WASH3PC4AMC7 463 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 GOLGA8KD6RF30 607 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 PGLSO95336 258 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 CRTAMO95727 393 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 SHBGP04278 402 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 GNSP15586 552 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 NFKBIAP25963 317 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 ATP5DP30049 168 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 CCNHP51946 323 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-208ENST00000553868 CRADDP78560 199 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 TRAF2Q12933 501 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 SEPT6Q14141 434 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 IHHQ14623 411 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 POU6F1Q14863 301 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 CRYMQ14894 314 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 PTPRNQ16849 979 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 HLA-BQ31612 363 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 ANKRD20A4Q4UJ75 823 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 Q6ZVU0 165 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.47□□□□□ -0.09
SHMT2-208ENST00000553868 LPCAT1Q8NF37 534 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 OR2W6PQ8NHA6 318 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 PDCD6IPQ8WUM4 868 aaKnown RBP14.47□□□□□ -0.09
SHMT2-208ENST00000553868 SORCS1Q8WY21 1168 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 PEX13Q92968 403 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 ZNF669Q96BR6 464 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-208ENST00000553868 HEPHQ9BQS7 1158 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 OSBPL1AQ9BXW6 950 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 ZDHHC5Q9C0B5 715 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 SUSD2Q9UGT4 822 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 SLC24A2Q9UI40 661 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 RABGEF1Q9UJ41 708 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 PCDHGC4Q9Y5F7 938 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 IKBKGQ9Y6K9 419 aa14.47□□□□□ -0.09
SHMT2-208ENST00000553868 EDDM13A0A1B0GTR0 161 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 PRRT4C9JH25 899 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 AGPSO00116 658 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 HTRA2O43464 458 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-208ENST00000553868 BNIP3LO60238 219 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 FZD6O60353 706 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 CDH16O75309 829 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 ZNF821O75541 412 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-208ENST00000553868 C6P13671 934 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 PRKCHP24723 683 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 TNFRSF4P43489 277 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 PDE1BQ01064 536 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 GALNT3Q14435 633 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 RASA2Q15283 850 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 DBX2Q6ZNG2 339 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 DPY19L3Q6ZPD9 716 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 OR6K2Q8NGY2 324 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 BRSK1Q8TDC3 778 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 FRS2Q8WU20 508 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 SH3GL2Q99962 352 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 MIR1-1HGQ9H1L0 117 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 TRABDQ9H4I3 376 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 ZDHHC6Q9H6R6 413 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 RIMKLBQ9ULI2 386 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 FAM169AQ9Y6X4 670 aa14.46□□□□□ -0.09
SHMT2-208ENST00000553868 UBR5O95071 2799 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-208ENST00000553868 TLDC2A0PJX2 215 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 TTC34A8MYJ7 566 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 ANKRD66B4E2M5 251 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 RGS16O15492 202 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-208ENST00000553868 FLRT2O43155 660 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 NDUFS2O75306 463 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 PRLP01236 227 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 NTRK1P04629 796 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 NDUFV2P19404 249 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 IL12RB1P42701 662 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 MSH2P43246 934 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 CSRP3P50461 194 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 POLR2LP62875 67 aaKnown RBP14.45□□□□□ -0.1
SHMT2-208ENST00000553868 MGAT5Q09328 741 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 SPTAN1Q13813 2472 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms