RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ATP13A1Q9HD20 1204 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 NGRNQ9NPE2 291 aaKnown RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 PCDHGB4Q9UN71 923 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 PCDHGB5Q9Y5G0 923 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 ZNF518AQ6AHZ1 1483 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 USP17L3A6NCW0 530 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 USP17L4A6NCW7 530 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 C9JVG2 144 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 ZNF609O15014 1411 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 GZMAP12544 262 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 PPP4CP60510 307 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 RNASEH2BQ5TBB1 312 aaKnown RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 FBXO42Q6P3S6 717 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 USP17L1Q7RTZ2 530 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 LINC00523Q86TU6 105 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 LACC1Q8IV20 430 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 C2orf69Q8N8R5 385 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 FNDC5Q8NAU1 212 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 ZNF420Q8TAQ5 688 aaPredicted RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 OTUB1Q96FW1 271 aaPredicted RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 MOGAT1Q96PD6 335 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 ERMAPQ96PL5 475 aaPredicted RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 MMP19Q99542 508 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 RNF26Q9BY78 433 aaPredicted RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 MUC13Q9H3R2 512 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 DPEP3Q9H4B8 488 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 PNPOQ9NVS9 261 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 CMTM6Q9NX76 183 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 MGAT4AQ9UM21 535 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 CLCA3PQ9Y6N3 262 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 DENRO43583 198 aaKnown RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 LDLRP01130 860 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 CYBBP04839 570 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 CSTF2P33240 577 aaKnown RBP eCLIP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 CYP2C18P33260 490 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 HTR7P34969 479 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 FYTTD1Q96QD9 318 aaKnown RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 SLC22A4Q9H015 551 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 CARS2Q9HA77 564 aaKnown RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 TREM1Q9NP99 234 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 KCNMB3Q9NPA1 279 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 FAM49BQ9NUQ9 324 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 TMEM216Q9P0N5 145 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 WASF3Q9UPY6 502 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 FARP1Q9Y4F1 1045 aaPredicted RBP8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 ADGRL2O95490 1459 aa8.98□□□□□ -0.97
GTF2A1-203ENST00000553612 A0A1W2PQJ5 194 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 SMIM30A4D0T7 59 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 LDOC1O95751 146 aaPredicted RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 RB1P06400 928 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 CYP19A1P11511 503 aaPredicted RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 EPHA3P29320 983 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 ERP29P30040 261 aaKnown RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 MAT2AP31153 395 aaKnown RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 EIF2DP41214 584 aaKnown RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 BTN3A2P78410 334 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 MPP2Q14168 576 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 SYT16Q17RD7 645 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 SPDYE2Q495Y8 402 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 KRBOX4Q5JUW0 171 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 ANKRD54Q6NXT1 300 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 AGAP2Q99490 1192 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 EBF4Q9BQW3 602 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 TAS2R14Q9NYV8 317 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 TAS2R3Q9NYW6 316 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 SLC22A7Q9Y694 548 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 A0A0A0MRY4 1105 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 LGALS8O00214 317 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 RLN2P04090 185 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 MYBP10242 640 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 IL7RP16871 459 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 GSTM5P46439 218 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 RAP1GAPP47736 663 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 RGS6P49758 472 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 OXA1LQ15070 435 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 RBBP7Q16576 425 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 UBAP2Q5T6F2 1119 aaKnown RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 GALNT5Q7Z7M9 940 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 DNAJA4Q8WW22 397 aaPredicted RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 LINGO1Q96FE5 620 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 DYNLL2Q96FJ2 89 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 ZSWIM1Q9BR11 485 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 METTL22Q9BUU2 404 aaPredicted RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 BTBD1Q9H0C5 482 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 TMPRSS11EQ9UL52 423 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 PCDHB8Q9UN66 801 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 CNTNAP2Q9UHC6 1331 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 GBX2P52951 348 aaPredicted RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 KLRC3Q07444 240 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 MGAT5BQ3V5L5 792 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 SPOUT1Q5T280 376 aaKnown RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 ENOSF1Q7L5Y1 443 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 RRM2BQ7LG56 351 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 GON7Q9BXV9 100 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 PCDHAC1Q9H158 963 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 ABCB8Q9NUT2 735 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 MED16Q9Y2X0 877 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 AIREO43918 545 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 STX11O75558 287 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms