RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 LHX5Q9H2C1 402 aa3.47□□□□□ -1.85
FOXN3-203ENST00000553353 PLEKHA5Q9HAU0 1116 aa3.47□□□□□ -1.85
FOXN3-203ENST00000553353 SGK2Q9HBY8 427 aa3.47□□□□□ -1.85
FOXN3-203ENST00000553353 POLD4Q9HCU8 107 aa3.47□□□□□ -1.85
FOXN3-203ENST00000553353 C6orf50Q9HD87 102 aa3.47□□□□□ -1.85
FOXN3-203ENST00000553353 PRSS16Q9NQE7 514 aa3.47□□□□□ -1.85
FOXN3-203ENST00000553353 ACSS2Q9NR19 701 aa3.47□□□□□ -1.85
FOXN3-203ENST00000553353 IL37Q9NZH6 218 aa3.47□□□□□ -1.85
FOXN3-203ENST00000553353 SFMBT1Q9UHJ3 866 aa3.47□□□□□ -1.85
FOXN3-203ENST00000553353 UBQLN1Q9UMX0 589 aaKnown RBP3.47□□□□□ -1.85
FOXN3-203ENST00000553353 VPS4AQ9UN37 437 aa3.47□□□□□ -1.85
FOXN3-203ENST00000553353 G3BP2Q9UN86 482 aaKnown RBP3.47□□□□□ -1.85
FOXN3-203ENST00000553353 TP53TG5Q9Y2B4 290 aa3.47□□□□□ -1.85
FOXN3-203ENST00000553353 DAAM1Q9Y4D1 1078 aa3.47□□□□□ -1.85
FOXN3-203ENST00000553353 ANK1P16157 1881 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 ARHGAP10A1A4S6 786 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 GAGE12BA1L429 117 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 FAM92AA1XBS5 289 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 GAGE12HA6NDE8 117 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 TMEM200CA6NKL6 621 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 LACTBL1A8MY62 500 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 NPC1O15118 1278 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 SCAMP1O15126 338 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 NKX2-8O15522 239 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 HOXA3O43365 443 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 PRPF3O43395 683 aaKnown RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 DUX1O43812 170 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 SHOX2O60902 331 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 PIAS2O75928 621 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 SMC2O95347 1197 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 CBX6O95503 412 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 YEATS4O95619 227 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 KLKB1P03952 638 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 HK1P19367 917 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 RPS6KB1P23443 525 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 GNA11P29992 359 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 EFNA5P52803 228 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 ELLP55199 621 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 EVCP57679 992 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 NOP14P78316 857 aaKnown RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 EXOSC10Q01780 885 aaKnown RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 MAPK7Q13164 816 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 TBX2Q13207 712 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 STARD3Q14849 445 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 DRAP1Q14919 205 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 NFE2Q16621 373 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 ANO4Q32M45 955 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 TMEM95Q3KNT9 176 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 MAP9Q49MG5 647 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 LACTB2Q53H82 288 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 TMEM177Q53S58 311 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 PRR30Q53SZ7 412 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 EARS2Q5JPH6 523 aaKnown RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 MANEAQ5SRI9 462 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 PAPD7Q5XG87 772 aaKnown RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 FBXO42Q6P3S6 717 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 NCEH1Q6PIU2 408 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 SYNE3Q6ZMZ3 975 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 GBP6Q6ZN66 633 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 RBM44Q6ZP01 1051 aaKnown RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 CCDC73Q6ZRK6 1079 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 B4GALNT4Q76KP1 1039 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 YTHDF3Q7Z739 585 aaKnown RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 KIAA0907Q7Z7F0 614 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 CCDC83Q8IWF9 413 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 C10orf67Q8IYJ2 551 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 FSIP1Q8NA03 581 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 Q8NA96 180 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 NSUN7Q8NE18 718 aaKnown RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 MCPH1Q8NEM0 835 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 IFI44Q8TCB0 444 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 MAPK15Q8TD08 544 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 RILPL2Q969X0 211 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 ZNF274Q96GC6 653 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 FUBP3Q96I24 572 aaKnown RBP eCLIP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 CEP295NLQ96MC4 621 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 CPPED1Q9BRF8 314 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 NTPCRQ9BSD7 190 aaKnown RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 RSPH9Q9H1X1 276 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 CXorf56Q9H5V9 222 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 USP29Q9HBJ7 922 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 PREBQ9HCU5 417 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 KLHL11Q9NVR0 708 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 ELOVL2Q9NXB9 296 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 NLGN3Q9NZ94 848 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 NDOR1Q9UHB4 597 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 DDX25Q9UHL0 483 aaKnown RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 PFDN2Q9UHV9 154 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 CDC23Q9UJX2 597 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 GTF3C4Q9UKN8 822 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 ITGB1BP2Q9UKP3 347 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 RPH3AQ9Y2J0 694 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-203ENST00000553353 FRMD4BQ9Y2L6 1034 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 NME7Q9Y5B8 376 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 MRFAP1Q9Y605 127 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 ARID2Q68CP9 1835 aa3.46□□□□□ -1.86
FOXN3-203ENST00000553353 JMJD1CQ15652 2540 aa3.45□□□□□ -1.86
FOXN3-203ENST00000553353 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.45□□□□□ -1.86
FOXN3-203ENST00000553353 A0A1W2PQM1 296 aa3.45□□□□□ -1.86
FOXN3-203ENST00000553353 TARSL2A2RTX5 802 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms