RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 GFM1Q96RP9 751 aaKnown RBP5.09□□□□□ -1.59
SCFD1-209ENST00000553280 CDRT15Q96T59 188 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 ST6GALNAC4Q9H4F1 302 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 EPB41L5Q9HCM4 733 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 TMEM184CQ9NVA4 438 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 ZNF148Q9UQR1 794 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 RAI2Q9Y5P3 530 aa5.09□□□□□ -1.59
SCFD1-209ENST00000553280 KAT6AQ92794 2004 aa5.09□□□□□ -1.6
SCFD1-209ENST00000553280 SMIM35A0A1B0GVV1 85 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 A0A1W2PPC1 479 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 MDM4O15151 490 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 ICAM1P05362 532 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 FYNP06241 537 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 PRLRP16471 622 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 DDX5P17844 614 aaKnown RBP5.08□□□□□ -1.6
SCFD1-209ENST00000553280 MAOAP21397 527 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 FBLP22087 321 aaKnown RBP5.08□□□□□ -1.6
SCFD1-209ENST00000553280 UBA1P22314 1058 aaKnown RBP5.08□□□□□ -1.6
SCFD1-209ENST00000553280 COMPP49747 757 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-209ENST00000553280 ARSEP51690 589 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 TMF1P82094 1093 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 NHLH1Q02575 133 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 SREBF2Q12772 1141 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 CAMK2DQ13557 499 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 LAMB3Q13751 1172 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 DUSP6Q16828 381 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 ZNF805Q5CZA5 627 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 KRBOX4Q5JUW0 171 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 GGNBP1Q5YKI7 109 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 SYCE2Q6PIF2 218 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 DCLRE1AQ6PJP8 1040 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 RBPMS2Q6ZRY4 209 aaKnown RBP5.08□□□□□ -1.6
SCFD1-209ENST00000553280 DNAJB7Q7Z6W7 309 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-209ENST00000553280 TTC30BQ8N4P2 665 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 TC2NQ8N9U0 490 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 ENGASEQ8NFI3 743 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 TSPAN14Q8NG11 270 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 FER1L6-AS2Q96M78 137 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 SH3GL2Q99962 352 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 NAA11Q9BSU3 229 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-209ENST00000553280 RTN4RQ9BZR6 473 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 SEMA4CQ9C0C4 833 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 SPATC1LQ9H0A9 340 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 KCNN2Q9H2S1 579 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 ABCF3Q9NUQ8 709 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 ANAPC5Q9UJX4 755 aa5.08□□□□□ -1.6
SCFD1-209ENST00000553280 CPED1A4D0V7 1026 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 MAGEB17A8MXT2 336 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 PI4K2BG5E9Z4 385 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 C22orf31O95567 290 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 CYC1P08574 325 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 MCCP23508 829 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 PTAFRP25105 342 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 GP5P40197 560 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 CSE1LP55060 971 aaKnown RBP5.07□□□□□ -1.6
SCFD1-209ENST00000553280 C21orf58P58505 322 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 MMEL1Q495T6 779 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 CBWD6Q4V339 395 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 CBWD3Q5JTY5 395 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 Q5PR19 223 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 SLC2A7Q6PXP3 512 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 SLC16A12Q6ZSM3 486 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 CAMKMTQ7Z624 323 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 SDCCAG8Q86SQ7 713 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-209ENST00000553280 GLRX5Q86SX6 157 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 XXYLT1Q8NBI6 393 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 ARRDC2Q8TBH0 407 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 PIGOQ8TEQ8 1089 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 LPGAT1Q92604 370 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 DPF1Q92782 380 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 ARSGQ96EG1 525 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 SIPA1Q96FS4 1042 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 JAKMIP1Q96N16 626 aaKnown RBP5.07□□□□□ -1.6
SCFD1-209ENST00000553280 SYT17Q9BSW7 474 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 POLDIP3Q9BY77 421 aaKnown RBP5.07□□□□□ -1.6
SCFD1-209ENST00000553280 GPR88Q9GZN0 384 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 PIGMQ9H3S5 423 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 ADARB2Q9NS39 739 aaKnown RBP5.07□□□□□ -1.6
SCFD1-209ENST00000553280 ACSS1Q9NUB1 689 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-209ENST00000553280 OR14J1Q9UGF5 321 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 RCOR1Q9UKL0 485 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 ACSL5Q9ULC5 683 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 TNFRSF18Q9Y5U5 241 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 COX11Q9Y6N1 276 aa5.07□□□□□ -1.6
SCFD1-209ENST00000553280 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.07□□□□□ -1.6
SCFD1-209ENST00000553280 COL11A2P13942 1736 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-209ENST00000553280 ZNF541Q9H0D2 1346 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 KANSL1LA0AUZ9 987 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 H0Y626 953 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 MAP2K7O14733 419 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 WNT9BO14905 357 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 TADA2AO75478 443 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 RSL1D1O76021 490 aaKnown RBP5.06□□□□□ -1.6
SCFD1-209ENST00000553280 RECQL5O94762 991 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-209ENST00000553280 HOXD9P28356 352 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-209ENST00000553280 CD38P28907 300 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 MPGP29372 298 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 OAS2P29728 719 aaKnown RBP5.06□□□□□ -1.6
SCFD1-209ENST00000553280 TNNT3P45378 269 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-209ENST00000553280 RASSF2P50749 326 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms