RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 ATMINO43313 823 aaPredicted RBP21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 MAFKO60675 156 aa21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 STK17BO94768 372 aa21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 DESP17661 470 aa21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 F8A1P23610 371 aa21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 HSPA9P38646 679 aaKnown RBP21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 C16orf46Q6P387 395 aa21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 CEACAM20Q6UY09 585 aa21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 IRF2BP2Q7Z5L9 587 aa21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 LZTR1Q8N653 840 aa21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 MIB2Q96AX9 1013 aa21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 COX14Q96I36 57 aa21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 PCMTD1Q96MG8 357 aaPredicted RBP21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 EFHD1Q9BUP0 239 aa21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 PRKAB1Q9Y478 270 aa21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 MRPS18BQ9Y676 258 aaKnown RBP21.5■■□□□ 1.03
SMARCD1-212ENST00000551966 PRR19A6NJB7 356 aa21.49■■□□□ 1.03
SMARCD1-212ENST00000551966 TMCO5BA8MYB1 307 aa21.49■■□□□ 1.03
SMARCD1-212ENST00000551966 DLGAP3O95886 979 aa21.49■■□□□ 1.03
SMARCD1-212ENST00000551966 AMPD1P23109 780 aa21.49■■□□□ 1.03
SMARCD1-212ENST00000551966 LRRC66Q68CR7 880 aa21.49■■□□□ 1.03
SMARCD1-212ENST00000551966 NLRP8Q86W28 1048 aa21.49■■□□□ 1.03
SMARCD1-212ENST00000551966 PSTKQ8IV42 348 aaKnown RBP21.49■■□□□ 1.03
SMARCD1-212ENST00000551966 STARD8Q92502 1023 aa21.49■■□□□ 1.03
SMARCD1-212ENST00000551966 ZPBPQ9BS86 351 aa21.49■■□□□ 1.03
SMARCD1-212ENST00000551966 ZMYND15Q9H091 742 aa21.49■■□□□ 1.03
SMARCD1-212ENST00000551966 NBASA2RRP1 2371 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 BLACEA4D250 179 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 MTSS1O43312 755 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 PRPSAP2O60256 369 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 FZD6O60353 706 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 DNAJC6O75061 913 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 LRCH4O75427 683 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 TPM2P07951 284 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 NR1D1P20393 614 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 NFKBIAP25963 317 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 CD97P48960 835 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 PPM1FP49593 454 aaPredicted RBP21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 HHEXQ03014 270 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 NFATC2Q13469 925 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 LRP8Q14114 963 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 IHHQ14623 411 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 CRTC2Q53ET0 693 aaPredicted RBP21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 LACTB2Q53H82 288 aaPredicted RBP21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 ARMC12Q5T9G4 340 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 IYDQ6PHW0 289 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 KDELC2Q7Z4H8 507 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 GALNT13Q8IUC8 556 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 NUP62CLQ9H1M0 184 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 TBC1D29Q9UFV1 150 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 ZNHIT2Q9UHR6 403 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 TP53TG5Q9Y2B4 290 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 KCNMB2Q9Y691 235 aa21.48■■□□□ 1.03
SMARCD1-212ENST00000551966 INPP4BO15327 924 aa21.47■■□□□ 1.03
SMARCD1-212ENST00000551966 RNF8O76064 485 aa21.47■■□□□ 1.03
SMARCD1-212ENST00000551966 TCN2P20062 427 aa21.47■■□□□ 1.03
SMARCD1-212ENST00000551966 IL1R2P27930 398 aa21.47■■□□□ 1.03
SMARCD1-212ENST00000551966 ZNF135P52742 658 aaPredicted RBP21.47■■□□□ 1.03
SMARCD1-212ENST00000551966 USP45Q70EL2 814 aa21.47■■□□□ 1.03
SMARCD1-212ENST00000551966 RNF31Q96EP0 1072 aa21.47■■□□□ 1.03
SMARCD1-212ENST00000551966 TRIT1Q9H3H1 467 aaKnown RBP21.47■■□□□ 1.03
SMARCD1-212ENST00000551966 SARS2Q9NP81 518 aaKnown RBP21.47■■□□□ 1.03
SMARCD1-212ENST00000551966 KLHL3Q9UH77 587 aa21.47■■□□□ 1.03
SMARCD1-212ENST00000551966 LIMA1Q9UHB6 759 aaKnown RBP21.47■■□□□ 1.03
SMARCD1-212ENST00000551966 CNOT6Q9ULM6 557 aaKnown RBP21.47■■□□□ 1.03
SMARCD1-212ENST00000551966 OAS3Q9Y6K5 1087 aaKnown RBP21.47■■□□□ 1.03
SMARCD1-212ENST00000551966 POLR1CO15160 346 aaPredicted RBP21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 ATP1A1P05023 1023 aaKnown RBP21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 FERP16591 822 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 STAT5AP42229 794 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 MMP13P45452 471 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 MLLT10P55197 1068 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 MC1RQ01726 317 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 UBXN1Q04323 297 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 KLRB1Q12918 225 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 C4orf17Q53FE4 359 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 RALGPS1Q5JS13 557 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 MARC1Q5VT66 337 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 ZNF765Q7L2R6 523 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 CHST15Q7LFX5 561 aaPredicted RBP21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 POLNQ7Z5Q5 900 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 EXD1Q8NHP7 514 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 ERGIC2Q96RQ1 377 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 WDR24Q96S15 920 aa21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 RIOK2Q9BVS4 552 aaKnown RBP21.46■■□□□ 1.03
SMARCD1-212ENST00000551966 LRRK2Q5S007 2527 aa21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 A6NCN8 305 aa21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 LRRC10BA6NIK2 292 aa21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 LGALS16A8MUM7 142 aa21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 ASMTLO95671 621 aa21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 FURINP09958 794 aa21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 TCF4P15884 667 aa21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 ZNF28P17035 718 aa21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 MAN1A1P33908 653 aa21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 HIST2H2BCQ6DN03 193 aa21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 TBC1D10AQ9BXI6 508 aa21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 ZWILCHQ9H900 591 aa21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 SIDT1Q9NXL6 827 aaKnown RBP21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 RPS6KL1Q9Y6S9 549 aa21.45■■□□□ 1.02
SMARCD1-212ENST00000551966 A0A0J9YYE9 177 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms