RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TRMT1LQ7Z2T5 733 aaKnown RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 MIER3Q7Z3K6 550 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 TRABD2AQ86V40 505 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 LONP2Q86WA8 852 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 ARID3BQ8IVW6 561 aaPredicted RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 SIRT6Q8N6T7 355 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 FRMD1Q8N878 549 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 NAXEQ8NCW5 288 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 TMEM161BQ8NDZ6 487 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 OR1N1Q8NGS0 311 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 OR10T2Q8NGX3 314 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 MYCBPAPQ8TBZ2 947 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PROKR1Q8TCW9 393 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 HASPINQ8TF76 798 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 RUFY2Q8WXA3 655 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 ING5Q8WYH8 240 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 OVCA2Q8WZ82 227 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 FAM3CQ92520 227 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 STAMQ92783 540 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 SMARCD2Q92925 531 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 TCEAL3Q969E4 200 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 C18orf25Q96B23 403 aaPredicted RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 MCRS1Q96EZ8 462 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 REXO5Q96IC2 774 aaKnown RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 FBXL20Q96IG2 436 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 MPP4Q96JB8 637 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PBKQ96KB5 322 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CEP170P1Q96L14 293 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 C20orf173Q96LM9 149 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 NLRP4Q96MN2 994 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 FNBP1Q96RU3 617 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 WDR24Q96S15 920 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 SLC22A12Q96S37 553 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 KIFC3Q9BVG8 833 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 TEKT3Q9BXF9 490 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CDT1Q9H211 546 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 VPS16Q9H269 839 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 ZHX3Q9H4I2 956 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 SERHL2Q9H4I8 314 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CCDC134Q9H6E4 229 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 POLD4Q9HCU8 107 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 C6orf50Q9HD87 102 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 LIN7CQ9NUP9 197 aaKnown RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 TMLHEQ9NVH6 421 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 KCTD5Q9NXV2 234 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 GTSE1Q9NYZ3 720 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 NDUFAF4Q9P032 175 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 GCNT4Q9P109 453 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PDP2Q9P2J9 529 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 ANKFY1Q9P2R3 1169 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 SLC13A4Q9UKG4 626 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 BAG5Q9UL15 447 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 RIMKLBQ9ULI2 386 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 MAFFQ9ULX9 164 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CNTN6Q9UQ52 1028 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 SH2B3Q9UQQ2 575 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 CCL26Q9Y258 94 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 TNFSF13BQ9Y275 285 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 TSC22D4Q9Y3Q8 395 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 PCDHGA5Q9Y5G8 931 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 INSL5Q9Y5Q6 135 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 STYXL1Q9Y6J8 313 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 NBPF19A0A087WUL8 3843 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 ABCA7Q8IZY2 2146 aa2.5□□□□□ -2.01
CPSF6-207ENST00000551516 KIF26AQ9ULI4 1882 aaPredicted RBP2.5□□□□□ -2.01
CPSF6-207ENST00000551516 NOTCH2Q04721 2471 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 KNTC1P50748 2209 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CABIN1Q9Y6J0 2220 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 SF3B1O75533 1304 aaKnown RBP eCLIP2.49□□□□□ -2.011e-6■■■■■ 28.3
CPSF6-207ENST00000551516 STK36Q9NRP7 1315 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 USP9XQ93008 2570 aaPredicted RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CENPVL1A0A0U1RR11 272 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 A0A1B0GVC2 190 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 ERICH2A1L162 156 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PIPSLA2A3N6 862 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 MTMR11A4FU01 709 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 FAM90A18PA6NE21 464 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 FAM90A16PA6NEW6 464 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 FAM90A9PA6NNJ1 464 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 FAM90A5PA8MXJ8 464 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 BTBD18B2RXH4 712 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 E7EVH7 732 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 SPECC1L-ADORA2AF8WAN1 911 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CES2O00748 559 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 SYN3O14994 580 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 MPPED1O15442 326 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CHMP2AO43633 222 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 TMPRSS11DO60235 418 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 FOXD2O60548 495 aaPredicted RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 PMPCBO75439 489 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 RPP40O75818 363 aaKnown RBP2.49□□□□□ -2.01
CPSF6-207ENST00000551516 AKAP3O75969 853 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 B3GAT3O94766 335 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 VNN1O95497 513 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 CER1O95813 267 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 POLBP06746 335 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 C1SP09871 688 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 OR4Q2P0C623 313 aa2.49□□□□□ -2.01
CPSF6-207ENST00000551516 FAM90A15PP0C7V4 464 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms