RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ZNF189O75820 626 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 ZFXP17010 805 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 KDELR1P24390 212 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 IL4RP24394 825 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 CD40P25942 277 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 EPHB2P29323 1055 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 GDI1P31150 447 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 SLC6A4P31645 630 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 CDKN2BP42772 138 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 CDH4P55283 916 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 CDH6P55285 790 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 TPI1P60174 286 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 GAD2Q05329 585 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 SLC12A1Q13621 1099 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 RIN1Q13671 783 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 RUNX3Q13761 415 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 DPYSQ14117 519 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 TFDP2Q14188 446 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 DPYSL3Q14195 570 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 LRRC32Q14392 662 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 DMC1Q14565 340 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 E2F5Q15329 346 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 DHCR24Q15392 516 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 SMTNL2Q2TAL5 461 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 PPP6R3Q5H9R7 873 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 LY6G5CQ5SRR4 150 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 FAM72AQ5TYM5 149 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 DAB2IPQ5VWQ8 1189 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 RAP1GAP2Q684P5 730 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 TXNRD3NBQ6F5E7 133 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 FAM72DQ6L9T8 149 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 RHBDF2Q6PJF5 856 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 SETD3Q86TU7 594 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 FAM72BQ86X60 149 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 TMEM25Q86YD3 366 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 LRRC49Q8IUZ0 686 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 CCDC117Q8IWD4 279 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 LGI2Q8N0V4 545 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 UMODL1-AS1Q8N2C9 162 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 SLC35F6Q8N357 371 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 ZNF808Q8N4W9 903 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 RTL3Q8N8U3 475 aaKnown RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 CSGALNACT1Q8TDX6 532 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 DDI1Q8WTU0 396 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 HSPH1Q92598 858 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 KRT35Q92764 455 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 GCDHQ92947 438 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 WBP2Q969T9 261 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 PRICKLE1Q96MT3 831 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 WDR92Q96MX6 357 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 RPRD1AQ96P16 312 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 CSPG4P5Q96PW8 444 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 BBS2Q9BXC9 721 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 CALN1Q9BXU9 219 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 PLA2G2FQ9BZM2 168 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 PITHD1Q9GZP4 211 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 SLC6A15Q9H2J7 730 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 LINC00597Q9H2U6 94 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 GOLPH3Q9H4A6 298 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 C8orf33Q9H7E9 229 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 BRD9Q9H8M2 597 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 ECT2Q9H8V3 914 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 TMEM248Q9NWD8 314 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 CWC15Q9P013 229 aaKnown RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 ZNF212Q9UDV6 495 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 XPO7Q9UIA9 1087 aaKnown RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 VANGL2Q9ULK5 521 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 TTC7AQ9ULT0 858 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-213ENST00000550629 SORCS3Q9UPU3 1222 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 NEU3Q9UQ49 428 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 SLC27A6Q9Y2P4 619 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 HYOU1Q9Y4L1 999 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 BDP1A6H8Y1 2624 aa5.86□□□□□ -1.47
SCAF11-213ENST00000550629 COL6A3P12111 3177 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 A0A0A6YYJ9 748 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 GOLGA6L7A0A1B0GV03 622 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 ILVBLA1L0T0 632 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 NCAM2O15394 837 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 DAPK3O43293 454 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 TIMM44O43615 452 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 CREB3O43889 395 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 SRGAP2O75044 1071 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 TJP3O95049 919 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 LUC7L3O95232 432 aaKnown RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 TYRP14679 529 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 HNRNPLP14866 589 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 ARSAP15289 507 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 GOT1P17174 413 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 TCP1P17987 556 aaKnown RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 SP100P23497 879 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 HOXD9P28356 352 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 SERPINB6P35237 376 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 MARCKSL1P49006 195 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 NR2C2P49116 596 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 SCNN1BP51168 640 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 NDST2P52849 883 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 PLK1P53350 603 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 YBEYP58557 167 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 RPS24P62847 133 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms