RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 ZNF490Q9ULM2 529 aaPredicted RBP12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 GLUD1P00367 558 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 NUDT17P0C025 328 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 CRTC3Q6UUV7 619 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 CRELD2Q6UXH1 353 aaPredicted RBP12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 PRRG4Q9BZD6 226 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 ADGRE2Q9UHX3 823 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 TRAF6Q9Y4K3 522 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 SMIM35A0A1B0GVV1 85 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 ZNF846Q147U1 533 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 MECRQ9BV79 373 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 SNX3O60493 162 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 CRHR1P34998 444 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 ARF5P84085 180 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 ATP13A5Q4VNC0 1218 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 VGLL2Q8N8G2 317 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 GBA3Q9H227 469 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 PRDM12Q9H4Q4 367 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 OR6C75A6NL08 312 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 FGBP02675 491 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 CAPSQ13938 189 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 CCNYL2Q5T2Q4 361 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 RHBDF2Q6PJF5 856 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 TMPRSS11AQ6ZMR5 421 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 LRRC55Q6ZSA7 311 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 TMC8Q8IU68 726 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 TCF12Q99081 682 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 HOPXQ9BPY8 73 aaPredicted RBP12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 C1QTNF1Q9BXJ1 281 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 IMP3Q9NV31 184 aaKnown RBP12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 SETD1AO15047 1707 aaKnown RBP12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 ERAL1O75616 437 aaKnown RBP12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 GIMD1P0DJR0 217 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 MARCKSL1P49006 195 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 FOLH1Q04609 750 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 RTL4Q6ZR62 310 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 TBC1D21Q8IYX1 336 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 NAT16Q8N8M0 369 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 FAM105AQ9NUU6 356 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 RBM7Q9Y580 266 aaKnown RBP12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 PCDHB1Q9Y5F3 818 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 SRRM3A6NNA2 597 aaPredicted RBP12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 GPR152Q8TDT2 470 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 MRPL45Q9BRJ2 306 aaKnown RBP12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 TBC1D14Q9P2M4 693 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 AP5Z1O43299 807 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 HTR7P34969 479 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 SSR2P43308 183 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 GLIS3Q8NEA6 775 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 FCRL2Q96LA5 508 aaPredicted RBP12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 ABCG4Q9H172 646 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 EQTNQ9NQ60 294 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 XPR1Q9UBH6 696 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 UBIAD1Q9Y5Z9 338 aa12.47□□□□□ -0.41
RAB3IP-212ENST00000550536 LRRC10BA6NIK2 292 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 CLDN11O75508 207 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 TOP3BO95985 862 aaKnown RBP12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 SHC3Q92529 594 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 ZNF304Q9HCX3 659 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 C1RP00736 705 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 BMT2Q1RMZ1 405 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 LRRC17Q8N6Y2 441 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 C5orf60A6NFR6 353 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 HAVCR1Q96D42 359 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 CHID1Q9BWS9 393 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 VWA7Q9Y334 891 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 A0A1W2PQH9 124 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 LOC110117498-PIK3R3F6TDL0 507 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 LYNP07948 512 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 POLR2JP52435 117 aaKnown RBP12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 CDK18Q07002 472 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 MYBPC3Q14896 1274 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 UBR7Q8N806 425 aa12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 RCOR3Q9P2K3 495 aaPredicted RBP12.46□□□□□ -0.41
RAB3IP-212ENST00000550536 GLYATL1P3A0A0U1RQE8 302 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 RPP40O75818 363 aaKnown RBP12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 RCN3Q96D15 328 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 A0A0J9YYE9 177 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 PRODHO43272 600 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 AHCYL1O43865 530 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 TCEA3O75764 348 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 APODP05090 189 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 TRAP1Q12931 704 aaKnown RBP12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 DUSP4Q13115 394 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 NXF3Q9H4D5 531 aaKnown RBP12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 PLLPQ9Y342 182 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 RBMXL2O75526 392 aaKnown RBP12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 CBX5P45973 191 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 LARS2Q15031 903 aaKnown RBP12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 PLPP4Q5VZY2 271 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 C12orf56Q8IXR9 622 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 KBTBD2Q8IY47 623 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 PRELID2Q8N945 189 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 GMIPQ9P107 970 aa12.46□□□□□ -0.42
RAB3IP-212ENST00000550536 DBTP11182 482 aaKnown RBP12.45□□□□□ -0.42
RAB3IP-212ENST00000550536 ERCC2P18074 760 aa12.45□□□□□ -0.42
RAB3IP-212ENST00000550536 ARF4P18085 180 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-212ENST00000550536 TARBP2Q15633 366 aaKnown RBP12.45□□□□□ -0.42
RAB3IP-212ENST00000550536 C12orf50Q8NA57 414 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms