RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TMEM9Q9P0T7 183 aa21.57■■□□□ 1.04
SMARCC2-210ENST00000550519 PDP2Q9P2J9 529 aa21.57■■□□□ 1.04
SMARCC2-210ENST00000550519 IP6K2Q9UHH9 426 aa21.57■■□□□ 1.04
SMARCC2-210ENST00000550519 SDK2Q58EX2 2172 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 PYGLP06737 847 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 CD48P09326 243 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 MPSTP25325 297 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 CSTF2P33240 577 aaKnown RBP eCLIP21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 ANP32AP39687 249 aaKnown RBP21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 GARSP41250 739 aaKnown RBP21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 CSRP3P50461 194 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 ATP1A2P50993 1020 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 STC1P52823 247 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 ITKQ08881 620 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 GALNT2Q10471 571 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 LRP8Q14114 963 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 KRT81Q14533 505 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 TMEM71Q6P5X7 295 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 MARK2Q7KZI7 788 aaKnown RBP21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 SFRP1Q8N474 314 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 CCDC112Q8NEF3 446 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 EXD1Q8NHP7 514 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 ART4Q93070 314 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 ANAPC7Q9UJX3 599 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 B3GALT1Q9Y5Z6 326 aa21.56■■□□□ 1.04
SMARCC2-210ENST00000550519 HECTD1Q9ULT8 2610 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 TERTO14746 1132 aaKnown RBP21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 SUV39H1O43463 412 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 MFSD11O43934 449 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 PRLP01236 227 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 CYP1A2P05177 515 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 CES1P23141 567 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 UGT1A3P35503 534 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 ARSEP51690 589 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 NFKB2Q00653 900 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 DSC2Q02487 901 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 PAFAH1B3Q15102 231 aaKnown RBP21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 TDRD12Q587J7 1177 aaKnown RBP21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 GALNT13Q8IUC8 556 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 RAVER1Q8IY67 606 aaKnown RBP21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 NRSN1Q8IZ57 195 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 SLC37A2Q8TED4 501 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 RIOK2Q9BVS4 552 aaKnown RBP21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 NUP85Q9BW27 656 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 TDRD1Q9BXT4 1180 aaKnown RBP21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 ASPSCR1Q9BZE9 553 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 GEMIN8Q9NWZ8 242 aaKnown RBP21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 IL17BQ9UHF5 180 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 AMACRQ9UHK6 382 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 DNPEPQ9ULA0 475 aa21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 BZW2Q9Y6E2 419 aaKnown RBP21.55■■□□□ 1.04
SMARCC2-210ENST00000550519 B4E171 279 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 MATN3O15232 486 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 EML2O95834 649 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 TSPAN7P41732 249 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 ZNF165P49910 485 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 EPHB1P54762 984 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 CLCA4Q14CN2 919 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 CCDC122Q5T0U0 273 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 NCBP2-AS2Q69YL0 99 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 ATG14Q6ZNE5 492 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 ARRDC2Q8TBH0 407 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 SYN2Q92777 582 aaPredicted RBP21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 FATE1Q969F0 183 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 TSGA13Q96PP4 275 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 LYSMD1Q96S90 227 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 OCIAD1Q9NX40 245 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 SLC39A1Q9NY26 324 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 CHKBQ9Y259 395 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 PCYT1BQ9Y5K3 369 aaPredicted RBP21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 MAST4O15021 2626 aa21.54■■□□□ 1.04
SMARCC2-210ENST00000550519 TRBV23OR9-2A0A075B6M9 112 aa21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 INPP4BO15327 924 aa21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 DNAJC6O75061 913 aa21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 CCNCP24863 283 aa21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 DPYSL3Q14195 570 aa21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 TIGD7Q6NT04 549 aaPredicted RBP21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 ZNF761Q86XN6 746 aaPredicted RBP21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 IL22RA1Q8N6P7 574 aa21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 BMPERQ8N8U9 685 aa21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 WDR24Q96S15 920 aa21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 SLC38A3Q99624 504 aa21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 TRIM4Q9C037 500 aa21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 RBM22Q9NW64 420 aaKnown RBP eCLIP21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 VPS18Q9P253 973 aa21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 CNOT6Q9ULM6 557 aaKnown RBP21.53■■□□□ 1.04
SMARCC2-210ENST00000550519 A0A1W2PQJ5 194 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 EFCAB7A8K855 629 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 MYO1FO00160 1098 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 PPFIA2O75334 1257 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 MAP3K6O95382 1288 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 CLDN7O95471 211 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 ASMTLO95671 621 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 LIFP15018 202 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 RAB15P59190 212 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 RPL26P61254 145 aaKnown RBP21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 IQCB1Q15051 598 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 IFI16Q16666 785 aaKnown RBP21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 HADHQ16836 314 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms