RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 WASP42768 502 aa14.96□□□□□ -0.02
CUX1-214ENST00000550008 CDH4P55283 916 aa14.96□□□□□ -0.02
CUX1-214ENST00000550008 MTX3Q5HYI7 312 aa14.96□□□□□ -0.02
CUX1-214ENST00000550008 TMCO2Q7Z6W1 182 aaPredicted RBP14.96□□□□□ -0.02
CUX1-214ENST00000550008 BRSK1Q8TDC3 778 aa14.96□□□□□ -0.02
CUX1-214ENST00000550008 LZICQ8WZA0 190 aa14.96□□□□□ -0.02
CUX1-214ENST00000550008 CIB1Q99828 191 aa14.96□□□□□ -0.02
CUX1-214ENST00000550008 SLC39A3Q9BRY0 314 aa14.96□□□□□ -0.02
CUX1-214ENST00000550008 NOL11Q9H8H0 719 aaKnown RBP14.96□□□□□ -0.02
CUX1-214ENST00000550008 PCDH12Q9NPG4 1184 aa14.96□□□□□ -0.02
CUX1-214ENST00000550008 MIEF1Q9NQG6 463 aa14.96□□□□□ -0.02
CUX1-214ENST00000550008 GIMAP2Q9UG22 337 aa14.96□□□□□ -0.02
CUX1-214ENST00000550008 LZTS1Q9Y250 596 aa14.96□□□□□ -0.02
CUX1-214ENST00000550008 C16orf96A6NNT2 1141 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 OR4F21O95013 312 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 CDH2P19022 906 aaPredicted RBP14.95□□□□□ -0.02
CUX1-214ENST00000550008 IL4RP24394 825 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 PEX2P28328 305 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 TREML1Q86YW5 311 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 CLDN19Q8N6F1 224 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 CDK15Q96Q40 435 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 RTKNQ9BST9 563 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 ZNF556Q9HAH1 456 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 COMMD8Q9NX08 183 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 ZDHHC2Q9UIJ5 367 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 A0A1W2PQ67 120 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 SLC7A4O43246 635 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 TLL1O43897 1013 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 HS6ST1O60243 411 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 WDR47O94967 919 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 HNRNPCP07910 306 aaKnown RBP eCLIP14.95□□□□□ -0.027e-7■■□□□ 13.7
CUX1-214ENST00000550008 CLCQ05315 142 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 RBFAQ8N0V3 343 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 PQLC1Q8N2U9 271 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 LPGAT1Q92604 370 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 PAPOLBQ9NRJ5 636 aaKnown RBP14.95□□□□□ -0.02
CUX1-214ENST00000550008 POLR3BQ9NW08 1133 aaPredicted RBP14.95□□□□□ -0.02
CUX1-214ENST00000550008 BLOC1S6Q9UL45 172 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 MTMR11A4FU01 709 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 PIP5K1BO14986 540 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 CATP04040 527 aaKnown RBP14.95□□□□□ -0.02
CUX1-214ENST00000550008 CREB5Q02930 508 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 PDK3Q15120 406 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 GRAMD4Q6IC98 578 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 MICU2Q8IYU8 434 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 S100A14Q9HCY8 104 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 PADI4Q9UM07 663 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 ZNF711Q9Y462 761 aa14.95□□□□□ -0.02
CUX1-214ENST00000550008 BCORQ6W2J9 1755 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 DEAF1O75398 565 aaPredicted RBP14.94□□□□□ -0.02
CUX1-214ENST00000550008 GGT5P36269 586 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 IL5RAQ01344 420 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 PCLAFQ15004 111 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 RAET1GQ6H3X3 334 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 SDE2Q6IQ49 451 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 PTCD2Q8WV60 388 aaKnown RBP14.94□□□□□ -0.02
CUX1-214ENST00000550008 RMND5BQ96G75 393 aaPredicted RBP14.94□□□□□ -0.02
CUX1-214ENST00000550008 CDKN2AIPNLQ96HQ2 116 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 OXCT2Q9BYC2 517 aaPredicted RBP14.94□□□□□ -0.02
CUX1-214ENST00000550008 PCDHAC1Q9H158 963 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 POMPQ9Y244 141 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 GLYATL1P3A0A0U1RQE8 302 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 ABLIM1O14639 778 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 GJB5O95377 273 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 DLDP09622 509 aaKnown RBP14.94□□□□□ -0.02
CUX1-214ENST00000550008 MAPK1P28482 360 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 GKP32189 559 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 HTRA3P83110 453 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 CRTC3Q6UUV7 619 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 FRMD7Q6ZUT3 714 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 GPR141Q7Z602 305 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 SPPL2CQ8IUH8 684 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 TMEM199Q8N511 208 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 SLAIN1Q8ND83 568 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 OR9I1Q8NGQ6 314 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 DNAJC28Q9NX36 388 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 TRPC4Q9UBN4 977 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 EVPLQ92817 2033 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 A0A1W2PQ45 241 aaPredicted RBP14.94□□□□□ -0.02
CUX1-214ENST00000550008 A0A1W2PQY0 241 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 H3BMM5 538 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 DCLK1O15075 740 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 MTX2O75431 263 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 C8AP07357 584 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 EFNA1P20827 205 aaPredicted RBP14.94□□□□□ -0.02
CUX1-214ENST00000550008 IGFBP6P24592 240 aaPredicted RBP14.94□□□□□ -0.02
CUX1-214ENST00000550008 HCAR3P49019 387 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 INPP1P49441 399 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 MSANTD2Q6P1R3 559 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 SUSD6Q92537 303 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 VPS33AQ96AX1 596 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 BDH2Q9BUT1 245 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 OXSMQ9NWU1 459 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 ANAPC2Q9UJX6 822 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 U3KQV3 271 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 DOCK2Q92608 1830 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 COL22A1Q8NFW1 1626 aaPredicted RBP14.94□□□□□ -0.02
CUX1-214ENST00000550008 COX7A2P14406 83 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 MAPKAPK2P49137 400 aa14.94□□□□□ -0.02
CUX1-214ENST00000550008 SERPINA9Q86WD7 417 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms