RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PEX11BO96011 259 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 NTRK1P04629 796 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 IGHV4-34P06331 123 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 POLBP06746 335 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 HMBSP08397 361 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 CKMT2P17540 419 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 IL10RBQ08334 325 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 TTC39BQ5VTQ0 682 aaPredicted RBP20■□□□□ 0.79
CTDSP2-204ENST00000548823 MARK2Q7KZI7 788 aaKnown RBP20■□□□□ 0.79
CTDSP2-204ENST00000548823 TEX26Q8N6G2 289 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 OR52K1Q8NGK4 314 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 DENND1AQ8TEH3 1009 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 MTBPQ96DY7 904 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 ZNF317Q96PQ6 595 aaPredicted RBP20■□□□□ 0.79
CTDSP2-204ENST00000548823 CCT8L2Q96SF2 557 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 DDX50Q9BQ39 737 aaKnown RBP20■□□□□ 0.79
CTDSP2-204ENST00000548823 FBRSQ9HAH7 460 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 IL17BQ9UHF5 180 aa20■□□□□ 0.79
CTDSP2-204ENST00000548823 ARID1BQ8NFD5 2236 aaPredicted RBP20■□□□□ 0.79
CTDSP2-204ENST00000548823 FAM237BA0A1B0GVD1 139 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 A0A1W2PPC4 97 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 NDUFAB1O14561 156 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 TYROBPO43914 113 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 DNTTP04053 509 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 SESN2P58004 480 aaPredicted RBP19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 INSM1Q01101 510 aaPredicted RBP19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 VAC14Q08AM6 782 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 CDH17Q12864 832 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 MPP2Q14168 576 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 FAM133BQ5BKY9 247 aaKnown RBP19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 RABGAP1LQ5R372 815 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 TMEM215Q68D42 235 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 KIAA0895LQ68EN5 471 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 TMEM135Q86UB9 458 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 CKAP2Q8WWK9 683 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 CDKL2Q92772 493 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 HMCESQ96FZ2 354 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 CHMP6Q96FZ7 201 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 OXNAD1Q96HP4 312 aaPredicted RBP19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 SLC6A18Q96N87 628 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 SLC2A11Q9BYW1 496 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 IL22Q9GZX6 179 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 TMEM245Q9H330 911 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 RBM22Q9NW64 420 aaKnown RBP eCLIP19.99■□□□□ 0.795e-10■■■■□ 26.4
CTDSP2-204ENST00000548823 SYBUQ9NX95 663 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 SAMD15Q9P1V8 674 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 STOML2Q9UJZ1 356 aa19.99■□□□□ 0.79
CTDSP2-204ENST00000548823 RAMP2O60895 175 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 USP1O94782 785 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 KLKB1P03952 638 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 WNT1P04628 370 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 SNRPAP09012 282 aaKnown RBP19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 EPHA8P29322 1005 aaPredicted RBP19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 ARRB1P49407 418 aaPredicted RBP19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 SEC24CP53992 1094 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 CDH4P55283 916 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 RPS14P62263 151 aaKnown RBP19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 SLC18A2Q05940 514 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 NIPAL4Q0D2K0 466 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 SERINC3Q13530 473 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 CRYMQ14894 314 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 TTC31Q49AM3 519 aaPredicted RBP19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 CHST9Q7L1S5 443 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 PRICKLE2Q7Z3G6 844 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 LSMEM2Q8N112 164 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 PPM1NQ8N819 430 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 NSMCE1Q8WV22 266 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 ZNF599Q96NL3 588 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 SLC25A51Q9H1U9 297 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 MAGEH1Q9H213 219 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 SMYD2Q9NRG4 433 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 GGA2Q9UJY4 613 aa19.98■□□□□ 0.79
CTDSP2-204ENST00000548823 A0A1W2PPM1 405 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 ERICH4A6NGS2 130 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 F5H423 210 aaPredicted RBP19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 KRT38O76015 456 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 ZWINTO95229 277 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 MT-ND3P03897 115 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 CYBBP04839 570 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 HLA-DQB2P05538 268 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 ADRA1AP35348 466 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 MPP3Q13368 585 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 SPARCL1Q14515 664 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 POLD3Q15054 466 aaPredicted RBP19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 CASC4Q6P4E1 433 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 TIFABQ6ZNK6 161 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 TFAP2DQ7Z6R9 452 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 SPATS2Q86XZ4 545 aaKnown RBP19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 CTAGE3PQ8IX95 158 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 LGI2Q8N0V4 545 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 ZNF473Q8WTR7 871 aaKnown RBP19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 PTCD2Q8WV60 388 aaKnown RBP19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 KCNE4Q8WWG9 221 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 DPH1Q9BZG8 443 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 SP110Q9HB58 689 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 CLEC4EQ9ULY5 219 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 SOX13Q9UN79 622 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 FAM169AQ9Y6X4 670 aa19.97■□□□□ 0.79
CTDSP2-204ENST00000548823 GOLGA6L7A0A1B0GV03 622 aa19.96■□□□□ 0.79
CTDSP2-204ENST00000548823 CXorf49A8MYA2 514 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms