RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 USP9YO00507 2555 aaPredicted RBP16.37■□□□□ 0.21
SSH1-208ENST00000548522 USP9XQ93008 2570 aaPredicted RBP16.37■□□□□ 0.21
SSH1-208ENST00000548522 B4E171 279 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 PSMD11O00231 422 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 PTMAP06454 111 aaKnown RBP16.37■□□□□ 0.21
SSH1-208ENST00000548522 CYP2A6P11509 494 aaPredicted RBP16.37■□□□□ 0.21
SSH1-208ENST00000548522 TEAD1P28347 426 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 TSPAN7P41732 249 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 GPR1P46091 355 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 SQSTM1Q13501 440 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 IHHQ14623 411 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 PYCR3Q53H96 274 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 ATP1A1-AS1Q5TC04 95 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 TMEM71Q6P5X7 295 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 ADAMTSL4Q6UY14 1074 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 TIPARPQ7Z3E1 657 aaKnown RBP16.37■□□□□ 0.21
SSH1-208ENST00000548522 CCDC112Q8NEF3 446 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 PIH1D2Q8WWB5 315 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 RTP4Q96DX8 246 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 SCRN2Q96FV2 425 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 APMAPQ9HDC9 416 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 RRAGDQ9NQL2 400 aaPredicted RBP16.37■□□□□ 0.21
SSH1-208ENST00000548522 ANKMY1Q9P2S6 941 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 TEX15Q9BXT5 2789 aa16.37■□□□□ 0.21
SSH1-208ENST00000548522 LOC101059948A0A1B0GTJ6 334 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 ZNF891A8MT65 544 aaPredicted RBP16.36■□□□□ 0.21
SSH1-208ENST00000548522 INPP4BO15327 924 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 ZW10O43264 779 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 RNF8O76064 485 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 ATP1A3P13637 1013 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 OAS2P29728 719 aaKnown RBP16.36■□□□□ 0.21
SSH1-208ENST00000548522 CCR10P46092 362 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 FASLGP48023 281 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 HCAR3P49019 387 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 PPM1FP49593 454 aaPredicted RBP16.36■□□□□ 0.21
SSH1-208ENST00000548522 ZNF75DP51815 510 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 DPTQ07507 201 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 DPYSL2Q16555 572 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 DCAF12Q5T6F0 453 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 TXNRD3NBQ6F5E7 133 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 USP45Q70EL2 814 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 SFRP1Q8N474 314 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 ATPAF2Q8N5M1 289 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 HSPH1Q92598 858 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 AP2M1Q96CW1 435 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 CSPG4P5Q96PW8 444 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 SLC38A3Q99624 504 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 ASPSCR1Q9BZE9 553 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 SPRY4Q9C004 299 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 ZWILCHQ9H900 591 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 GPN2Q9H9Y4 310 aaPredicted RBP16.36■□□□□ 0.21
SSH1-208ENST00000548522 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.36■□□□□ 0.21
SSH1-208ENST00000548522 PDP2Q9P2J9 529 aa16.36■□□□□ 0.21
SSH1-208ENST00000548522 CNOT8Q9UFF9 292 aaKnown RBP16.36■□□□□ 0.21
SSH1-208ENST00000548522 OAS3Q9Y6K5 1087 aaKnown RBP16.36■□□□□ 0.21
SSH1-208ENST00000548522 A0A1W2PQ67 120 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 LRRC53A6NM62 1247 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 H3BRJ5 948 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 HSPA9P38646 679 aaKnown RBP16.35■□□□□ 0.21
SSH1-208ENST00000548522 MMP13P45452 471 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 GPLD1P80108 840 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 FOXK1P85037 733 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 MYL5Q02045 173 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 CDC20Q12834 499 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 NFATC2Q13469 925 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 NCAPHQ15003 741 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.35■□□□□ 0.21
SSH1-208ENST00000548522 ARMC12Q5T9G4 340 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 TMCO3Q6UWJ1 677 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 ZNF571Q7Z3V5 609 aaPredicted RBP16.35■□□□□ 0.21
SSH1-208ENST00000548522 POLNQ7Z5Q5 900 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 GALNT13Q8IUC8 556 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 PSTKQ8IV42 348 aaKnown RBP16.35■□□□□ 0.21
SSH1-208ENST00000548522 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.35■□□□□ 0.21
SSH1-208ENST00000548522 LZTR1Q8N653 840 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 ZNF653Q96CK0 615 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 AHCYL2Q96HN2 611 aaKnown RBP16.35■□□□□ 0.21
SSH1-208ENST00000548522 SLC45A3Q96JT2 553 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 NT5MQ9NPB1 228 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 KCTD5Q9NXV2 234 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 TUBD1Q9UJT1 453 aa16.35■□□□□ 0.21
SSH1-208ENST00000548522 FZD6O60353 706 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 FTLP02792 175 aaPredicted RBP16.34■□□□□ 0.21
SSH1-208ENST00000548522 ATP1A1P05023 1023 aaKnown RBP16.34■□□□□ 0.21
SSH1-208ENST00000548522 CASRP41180 1078 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 MAPK9P45984 424 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 RAB15P59190 212 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 PTSQ03393 145 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 ARHGAP22Q7Z5H3 698 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 NLGN4XQ8N0W4 816 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 NLGN4YQ8NFZ3 816 aaPredicted RBP16.34■□□□□ 0.21
SSH1-208ENST00000548522 OR10G6Q8NH81 332 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 C9orf43Q8TAL5 461 aaPredicted RBP16.34■□□□□ 0.21
SSH1-208ENST00000548522 COX14Q96I36 57 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 RIOK2Q9BVS4 552 aaKnown RBP16.34■□□□□ 0.21
SSH1-208ENST00000548522 HAUS4Q9H6D7 363 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 MYO1AQ9UBC5 1043 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 TBC1D29Q9UFV1 150 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 KLHL3Q9UH77 587 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 KCNK6Q9Y257 313 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms