RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 MAPK9P45984 424 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 GPR3P46089 330 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 STC1P52823 247 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 LIMK2P53671 638 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 PEX6Q13608 980 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 TBR1Q16650 682 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 ATP13A4Q4VNC1 1196 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 PYCR3Q53H96 274 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 ZFYVE27Q5T4F4 411 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 DTX1Q86Y01 620 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 NRSN1Q8IZ57 195 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 IL22RA1Q8N6P7 574 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 CCDC112Q8NEF3 446 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 OR4D9Q8NGE8 314 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 TAAR9Q96RI9 348 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 SLC38A3Q99624 504 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 ZNHIT2Q9UHR6 403 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 B3GALT1Q9Y5Z6 326 aa20.24■□□□□ 0.83
SSH1-207ENST00000547862 EFCAB7A8K855 629 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 A8MU76 341 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 FZD6O60353 706 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 CLDN7O95471 211 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 ITGB2P05107 769 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 HLA-DQB2P05538 268 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 THRAP10827 490 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 ZNF30P17039 623 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 ARSDP51689 593 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 PTSQ03393 145 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 GALNT2Q10471 571 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 NFATC2Q13469 925 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 DPYSL3Q14195 570 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 HADHQ16836 314 aaKnown RBP20.23■□□□□ 0.83
SSH1-207ENST00000547862 TIGD7Q6NT04 549 aaPredicted RBP20.23■□□□□ 0.83
SSH1-207ENST00000547862 CHST15Q7LFX5 561 aaPredicted RBP20.23■□□□□ 0.83
SSH1-207ENST00000547862 TEX26Q8N6G2 289 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 AGBL5Q8NDL9 886 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 ZNF564Q8TBZ8 553 aaPredicted RBP20.23■□□□□ 0.83
SSH1-207ENST00000547862 TDRD1Q9BXT4 1180 aaKnown RBP20.23■□□□□ 0.83
SSH1-207ENST00000547862 ZNF106Q9H2Y7 1883 aaKnown RBP20.23■□□□□ 0.83
SSH1-207ENST00000547862 RBM22Q9NW64 420 aaKnown RBP eCLIP20.23■□□□□ 0.83
SSH1-207ENST00000547862 OCIAD1Q9NX40 245 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 SLC39A1Q9NY26 324 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 KCNK6Q9Y257 313 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 PPIL1Q9Y3C6 166 aa20.23■□□□□ 0.83
SSH1-207ENST00000547862 PCYT1BQ9Y5K3 369 aaPredicted RBP20.23■□□□□ 0.83
SSH1-207ENST00000547862 A0A087X0T9 212 aa20.22■□□□□ 0.83
SSH1-207ENST00000547862 MYO1FO00160 1098 aa20.22■□□□□ 0.83
SSH1-207ENST00000547862 DUX1O43812 170 aa20.22■□□□□ 0.83
SSH1-207ENST00000547862 EML2O95834 649 aa20.22■□□□□ 0.83
SSH1-207ENST00000547862 SLC4A1P02730 911 aa20.22■□□□□ 0.83
SSH1-207ENST00000547862 CYP1A2P05177 515 aa20.22■□□□□ 0.83
SSH1-207ENST00000547862 FAM228BP0C875 321 aa20.22■□□□□ 0.83
SSH1-207ENST00000547862 IL4RP24394 825 aa20.22■□□□□ 0.83
SSH1-207ENST00000547862 KCNC4Q03721 635 aa20.22■□□□□ 0.83
SSH1-207ENST00000547862 IHHQ14623 411 aa20.22■□□□□ 0.83
SSH1-207ENST00000547862 NR1I3Q14994 352 aa20.22■□□□□ 0.83
SSH1-207ENST00000547862 CLPPQ16740 277 aaPredicted RBP20.22■□□□□ 0.83
SSH1-207ENST00000547862 KCTD6Q8NC69 237 aa20.22■□□□□ 0.83
SSH1-207ENST00000547862 RCOR3Q9P2K3 495 aaPredicted RBP20.22■□□□□ 0.83
SSH1-207ENST00000547862 OAS3Q9Y6K5 1087 aaKnown RBP20.22■□□□□ 0.83
SSH1-207ENST00000547862 C1orf232A0A0U1RR37 186 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 SNX2O60749 519 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 WISP1O95388 367 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 SERPING1P05155 500 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 ACP5P13686 325 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 LIFP15018 202 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 CA4P22748 312 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 FANCCQ00597 558 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 TRA2AQ13595 282 aaKnown RBP eCLIP20.21■□□□□ 0.83
SSH1-207ENST00000547862 IQCB1Q15051 598 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 PAFAH1B3Q15102 231 aaKnown RBP20.21■□□□□ 0.83
SSH1-207ENST00000547862 ANKRD20A8PQ5CZ79 823 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 FIGNQ5HY92 759 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 FAM182AQ5T1J6 154 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 ANKS6Q68DC2 871 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 ZNF765Q7L2R6 523 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 LUZP1Q86V48 1076 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 OR10G6Q8NH81 332 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 EXD1Q8NHP7 514 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 MAML1Q92585 1016 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 NKD1Q969G9 470 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 SCARF2Q96GP6 870 aaPredicted RBP20.21■□□□□ 0.83
SSH1-207ENST00000547862 FUCA2Q9BTY2 467 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 PCDH9Q9HC56 1237 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 KLHL3Q9UH77 587 aa20.21■□□□□ 0.83
SSH1-207ENST00000547862 BZW2Q9Y6E2 419 aaKnown RBP20.21■□□□□ 0.83
SSH1-207ENST00000547862 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.2■□□□□ 0.82
SSH1-207ENST00000547862 MATN3O15232 486 aa20.2■□□□□ 0.82
SSH1-207ENST00000547862 PYGLP06737 847 aa20.2■□□□□ 0.82
SSH1-207ENST00000547862 UGT1A3P35503 534 aa20.2■□□□□ 0.82
SSH1-207ENST00000547862 TPM4P67936 248 aa20.2■□□□□ 0.82
SSH1-207ENST00000547862 HHEXQ03014 270 aa20.2■□□□□ 0.82
SSH1-207ENST00000547862 GBE1Q04446 702 aa20.2■□□□□ 0.82
SSH1-207ENST00000547862 NIPAL4Q0D2K0 466 aa20.2■□□□□ 0.82
SSH1-207ENST00000547862 CLCA4Q14CN2 919 aa20.2■□□□□ 0.82
SSH1-207ENST00000547862 IFI16Q16666 785 aaKnown RBP20.2■□□□□ 0.82
SSH1-207ENST00000547862 LRRC49Q8IUZ0 686 aa20.2■□□□□ 0.82
SSH1-207ENST00000547862 CACNA2D3Q8IZS8 1091 aa20.2■□□□□ 0.82
SSH1-207ENST00000547862 CCNYQ8ND76 341 aa20.2■□□□□ 0.82
SSH1-207ENST00000547862 RNF31Q96EP0 1072 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms