RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ARL13AQ5H913 290 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-210ENST00000547654 MPP7Q5T2T1 576 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 KRT79Q5XKE5 535 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 SUSD1Q6UWL2 747 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 C9orf47Q6ZRZ4 202 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 MSANTD1Q6ZTZ1 278 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 OTOAQ7RTW8 1153 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 UBE2Q1Q7Z7E8 422 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 IQCHQ86VS3 1027 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 TDRPQ86YL5 185 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 TUSC5Q8IXB3 177 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 MMP21Q8N119 569 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 DPP10Q8N608 796 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 XXYLT1Q8NBI6 393 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 OSR1Q8TAX0 266 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-210ENST00000547654 KCNE4Q8WWG9 221 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 ATP6V0A1Q93050 837 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 ST6GALNAC4Q9H4F1 302 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 TMEM248Q9NWD8 314 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 HPF1Q9NWY4 346 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 WSB2Q9NYS7 404 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-210ENST00000547654 FBXO40Q9UH90 709 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 PROCRQ9UNN8 238 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 FAM96BQ9Y3D0 163 aa4.33□□□□□ -1.72
SCAF11-210ENST00000547654 MTF2Q9Y483 593 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-210ENST00000547654 MAGI1Q96QZ7 1491 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-210ENST00000547654 PSMD14O00487 310 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 RRHO14718 337 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 ADAMDEC1O15204 470 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 PAPSS1O43252 624 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-210ENST00000547654 ZBTB14O43829 449 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 TADA2AO75478 443 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 GPC4O75487 556 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 SLC22A3O75751 556 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 TFP02787 698 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 CYP19A1P11511 503 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-210ENST00000547654 CTPS1P17812 591 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 TRIM21P19474 475 aaKnown RBP4.32□□□□□ -1.72
SCAF11-210ENST00000547654 HOXC8P31273 242 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 COPB1P53618 953 aaKnown RBP4.32□□□□□ -1.72
SCAF11-210ENST00000547654 EVCP57679 992 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 RALGDSQ12967 914 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 SLC14A1Q13336 389 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 KCNC3Q14003 757 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 DRAP1Q14919 205 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-210ENST00000547654 TYSND1Q2T9J0 566 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 COL28A1Q2UY09 1125 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 NHSL2Q5HYW2 709 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 CC2D1BQ5T0F9 858 aaKnown RBP4.32□□□□□ -1.72
SCAF11-210ENST00000547654 ARMC4Q5T2S8 1044 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 DLK2Q6UY11 383 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 RBPMS2Q6ZRY4 209 aaKnown RBP4.32□□□□□ -1.72
SCAF11-210ENST00000547654 CAMKMTQ7Z624 323 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 KLBQ86Z14 1044 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 SIX6OS1Q8N1H7 587 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 TC2NQ8N9U0 490 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 CAMKVQ8NCB2 501 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 UTP15Q8TED0 518 aaKnown RBP4.32□□□□□ -1.72
SCAF11-210ENST00000547654 TEKT4Q8WW24 435 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 MR1Q95460 341 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 PABPC5Q96DU9 382 aaKnown RBP4.32□□□□□ -1.72
SCAF11-210ENST00000547654 THOC3Q96J01 351 aaKnown RBP4.32□□□□□ -1.72
SCAF11-210ENST00000547654 ADAD1Q96M93 576 aaKnown RBP4.32□□□□□ -1.72
SCAF11-210ENST00000547654 TMEM68Q96MH6 324 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 SIGLEC11Q96RL6 698 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 MGME1Q9BQP7 344 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 NUP85Q9BW27 656 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 GLIS2Q9BZE0 524 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-210ENST00000547654 FAM129AQ9BZQ8 928 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 ABCG4Q9H172 646 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 HIPK2Q9H2X6 1198 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 PDZD7Q9H5P4 517 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 ABCB8Q9NUT2 735 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 ASNSD1Q9NWL6 643 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 CARD8Q9Y2G2 431 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 CMAHPQ9Y471 501 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 MAU2Q9Y6X3 613 aa4.32□□□□□ -1.72
SCAF11-210ENST00000547654 DNMBPQ6XZF7 1577 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 PTPRMP28827 1452 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 UTYO14607 1347 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 LOC102723996A0A087X1L8 192 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-210ENST00000547654 LRRD1A4D1F6 860 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 A4D1N5 150 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 OR6C76A6NM76 312 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 ZNF263O14978 683 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 USP12O75317 370 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 PNPP00491 289 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 PENKP01210 267 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-210ENST00000547654 PSG1P11464 419 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 PCNAP12004 261 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 FCGR2AP12318 317 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 ZNF182P17025 639 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-210ENST00000547654 PRKCIP41743 596 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 ARSFP54793 590 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 SLC12A2P55011 1212 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 RCN2Q14257 317 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 PPA1Q15181 289 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 RPE65Q16518 533 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 CXorf66Q5JRM2 361 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms