RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 DSG3P32926 999 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 MAPK8P45983 427 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 RORCP51449 518 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 MOGSQ13724 837 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 E2F2Q14209 437 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 ZNF404Q494X3 552 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 TIFABQ6ZNK6 161 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 SLITRK4Q8IW52 837 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 SMARCD1Q96GM5 515 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 LRRC3Q9BY71 257 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 ACTR3BQ9P1U1 418 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 TRPC4Q9UBN4 977 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 ERVK-11Q9UQG0 969 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 NPPAP01160 153 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 GLDCP23378 1020 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 CD97P48960 835 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 ENTPD1P49961 510 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 LAMTOR4Q0VGL1 99 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 NIPA2Q8N8Q9 360 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 OR6J1Q8NGC5 347 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 HDAC10Q969S8 669 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 SLC45A3Q96JT2 553 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 KREMEN1Q96MU8 473 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 GSDMCQ9BYG8 508 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 TSPAN4O14817 238 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 METTL18O95568 372 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 CATP04040 527 aaKnown RBP12.76□□□□□ -0.37
PTCH1-212ENST00000546744 FGF1P05230 155 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 SERPIND1P05546 499 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 NR4A1P22736 598 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 LCP2Q13094 533 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 ZBTB46Q86UZ6 589 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 LAPTM4BQ86VI4 370 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 GALNT6Q8NCL4 622 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 ISOC1Q96CN7 298 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 KCTD15Q96SI1 283 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-212ENST00000546744 ZNF607Q96SK3 696 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 FKBP14Q9NWM8 211 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 ATPIF1Q9UII2 106 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 PSMD11O00231 422 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 CCRL2O00421 344 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 ZBTB14O43829 449 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 ANXA8P13928 327 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 ADIGQ0VDE8 80 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 TEAD4Q15561 434 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 LDLRAP1Q5SW96 308 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 C6orf183Q5T699 404 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 CMC1Q7Z7K0 106 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 SLC34A3Q8N130 599 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 CLHC1Q8NHS4 586 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 SLC35B2Q8TB61 432 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 COPS4Q9BT78 406 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 TOR4AQ9NXH8 423 aa12.76□□□□□ -0.37
PTCH1-212ENST00000546744 ANKRD63C9JTQ0 380 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 BANF1O75531 89 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 CXCL8P10145 99 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 CACNB2Q08289 660 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-212ENST00000546744 RALGDSQ12967 914 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 CRY1Q16526 586 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 DPY19L1Q2PZI1 675 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 GLT6D1Q7Z4J2 308 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 ANKRD23Q86SG2 305 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 CYP4X1Q8N118 509 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 TEX47Q8TBZ9 253 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 C1GALT1C1Q96EU7 318 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 GLT1D1Q96MS3 346 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 DCSTAMPQ9H295 470 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 RAD18Q9NS91 495 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.75□□□□□ -0.37
PTCH1-212ENST00000546744 ZNF70Q9UC06 446 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-212ENST00000546744 HMGXB4Q9UGU5 601 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 ABCG2Q9UNQ0 655 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 ITM2BQ9Y287 266 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 COQ4Q9Y3A0 265 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 PCP4L1A6NKN8 68 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 FABP3P05413 133 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 HNRNPLP14866 589 aaKnown RBP eCLIP12.75□□□□□ -0.37
PTCH1-212ENST00000546744 DPEP1P16444 411 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 ASMTP46597 345 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 HNMTP50135 292 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 THOP1P52888 689 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 HMGCS2P54868 508 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 PITPNAQ00169 270 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 FAM91A1Q658Y4 838 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 CHMP1BQ7LBR1 199 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 HDAC2Q92769 488 aaKnown RBP12.75□□□□□ -0.37
PTCH1-212ENST00000546744 PANX1Q96RD7 426 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 GTPBP2Q9BX10 602 aaKnown RBP12.75□□□□□ -0.37
PTCH1-212ENST00000546744 ELOVL4Q9GZR5 314 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 ZNF112Q9UJU3 913 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 NOCTQ9UK39 431 aaKnown RBP12.75□□□□□ -0.37
PTCH1-212ENST00000546744 MYH3P11055 1940 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 C10orf71Q711Q0 1435 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 TCRBV7S2A1N4TA0A589 114 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 FABP12A6NFH5 140 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 EI24O14681 340 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 MAGEB3O15480 346 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 PDPK1O15530 556 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 UPP2O95045 317 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 AP2A1O95782 977 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms