RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 JAMLQ86YT9 394 aa9.31□□□□□ -0.92
YBX3-218ENST00000546298 GALNT13Q8IUC8 556 aa9.31□□□□□ -0.92
YBX3-218ENST00000546298 PLD5Q8N7P1 536 aa9.31□□□□□ -0.92
YBX3-218ENST00000546298 RNF214Q8ND24 703 aa9.31□□□□□ -0.92
YBX3-218ENST00000546298 SLC39A7Q92504 469 aa9.31□□□□□ -0.92
YBX3-218ENST00000546298 RNF25Q96BH1 459 aaPredicted RBP9.31□□□□□ -0.92
YBX3-218ENST00000546298 WBP1Q96G27 269 aa9.31□□□□□ -0.92
YBX3-218ENST00000546298 BBC3Q96PG8 261 aaPredicted RBP9.31□□□□□ -0.92
YBX3-218ENST00000546298 FOXP3Q9BZS1 431 aa9.31□□□□□ -0.92
YBX3-218ENST00000546298 RMI1Q9H9A7 625 aa9.31□□□□□ -0.92
YBX3-218ENST00000546298 LUC7LQ9NQ29 371 aaKnown RBP9.31□□□□□ -0.92
YBX3-218ENST00000546298 PISDQ9UG56 409 aa9.31□□□□□ -0.92
YBX3-218ENST00000546298 LOXL2Q9Y4K0 774 aa9.31□□□□□ -0.92
YBX3-218ENST00000546298 LAMA1P25391 3075 aa9.31□□□□□ -0.92
YBX3-218ENST00000546298 ZFYVE26Q68DK2 2539 aa9.31□□□□□ -0.92
YBX3-218ENST00000546298 ANKRD11Q6UB99 2663 aaPredicted RBP9.3□□□□□ -0.92
YBX3-218ENST00000546298 CHD6Q8TD26 2715 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 A0A0U1RQS6 177 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 ERVH48-1M5A8F1 160 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 HGSO14964 777 aaPredicted RBP9.3□□□□□ -0.92
YBX3-218ENST00000546298 INPP4BO15327 924 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 MTSS1O43312 755 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 B4GAT1O43505 415 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 ECEL1O95672 775 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 SOD1P00441 154 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 TNNT1P13805 278 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 SLC2A4P14672 509 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 SLC5A2P31639 672 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 NOP2P46087 812 aaKnown RBP9.3□□□□□ -0.92
YBX3-218ENST00000546298 SPINT3P49223 89 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 C19orf57Q0VDD7 668 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 ZBTB17Q13105 803 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 TRA2AQ13595 282 aaKnown RBP eCLIP9.3□□□□□ -0.922e-6■■■■■ 27.7
YBX3-218ENST00000546298 IHHQ14623 411 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 NR1D2Q14995 579 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 TAF1BQ53T94 588 aaPredicted RBP9.3□□□□□ -0.92
YBX3-218ENST00000546298 PHF19Q5T6S3 580 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 ARHGAP40Q5TG30 622 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 CCDC81Q6ZN84 652 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 RFLNAQ6ZTI6 216 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 USP53Q70EK8 1073 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 MARK2Q7KZI7 788 aaKnown RBP9.3□□□□□ -0.92
YBX3-218ENST00000546298 SLITRK4Q8IW52 837 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 SFTPA2Q8IWL1 248 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 NAGSQ8N159 534 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 CNTD1Q8N815 330 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 AVL9Q8NBF6 648 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 LRRN4Q8WUT4 740 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 SNRNP27Q8WVK2 155 aaKnown RBP9.3□□□□□ -0.92
YBX3-218ENST00000546298 SH3KBP1Q96B97 665 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 IMP4Q96G21 291 aaKnown RBP9.3□□□□□ -0.92
YBX3-218ENST00000546298 COX14Q96I36 57 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 SMIM14Q96QK8 99 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 AGAP2Q99490 1192 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 TRIM5Q9C035 493 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 B3GNT4Q9C0J1 378 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 SLC25A51Q9H1U9 297 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 STN1Q9H668 368 aaKnown RBP9.3□□□□□ -0.92
YBX3-218ENST00000546298 ZFYVE1Q9HBF4 777 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 SEPT10Q9P0V9 454 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 ZNHIT2Q9UHR6 403 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 ACSL6Q9UKU0 697 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 ATXN7L1Q9ULK2 861 aaPredicted RBP9.3□□□□□ -0.92
YBX3-218ENST00000546298 SSUH2Q9Y2M2 353 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 PCDHB11Q9Y5F2 797 aa9.3□□□□□ -0.92
YBX3-218ENST00000546298 PMS2P1A4D2B8 440 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 C3orf70A6NLC5 250 aaPredicted RBP9.29□□□□□ -0.92
YBX3-218ENST00000546298 GPR89AB7ZAQ6 455 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 CASC3O15234 703 aaKnown RBP9.29□□□□□ -0.92
YBX3-218ENST00000546298 PSTPIP1O43586 416 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 MMP2P08253 660 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 GPR89BP0CG08 455 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 COMTP21964 271 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 CD82P27701 267 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 MAGEA1P43355 309 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 TNNT3P45378 269 aaPredicted RBP9.29□□□□□ -0.92
YBX3-218ENST00000546298 HADHBP55084 474 aaKnown RBP9.29□□□□□ -0.92
YBX3-218ENST00000546298 OR1D5P58170 312 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 DYNLT1P63172 113 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 GPLD1P80108 840 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 CDK18Q07002 472 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 SQSTM1Q13501 440 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 SPA17Q15506 151 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 TEX44Q53QW1 395 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 HENMT1Q5T8I9 393 aaKnown RBP9.29□□□□□ -0.92
YBX3-218ENST00000546298 TRIM74Q86UV6 250 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 CCDC112Q8NEF3 446 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 OR10G6Q8NH81 332 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 PTCD2Q8WV60 388 aaKnown RBP9.29□□□□□ -0.92
YBX3-218ENST00000546298 AHCYL2Q96HN2 611 aaKnown RBP9.29□□□□□ -0.92
YBX3-218ENST00000546298 AGAP3Q96P47 875 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 OLFM3Q96PB7 478 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 CCNL2Q96S94 520 aaPredicted RBP9.29□□□□□ -0.92
YBX3-218ENST00000546298 ZSCAN5AQ9BUG6 496 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 GPR63Q9BZJ6 419 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 RDH14Q9HBH5 336 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 GLOD4Q9HC38 313 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 CPNE5Q9HCH3 593 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 MAGEE1Q9HCI5 957 aa9.29□□□□□ -0.92
YBX3-218ENST00000546298 WDR70Q9NW82 654 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms