RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 FUT4P22083 530 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 ITGA3P26006 1051 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 PTGER4P35408 488 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 STAT6P42226 847 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 CASP4P49662 377 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 PGDP52209 483 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 LIMK2P53671 638 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 PMS2P54278 862 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 DAOAP59103 153 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 ADIGQ0VDE8 80 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 BST2Q10589 180 aaKnown RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 PAK1Q13153 545 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 MRPL49Q13405 166 aaKnown RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 LSAMPQ13449 338 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 PEX6Q13608 980 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 INPP5JQ15735 1006 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 ARHGAP44Q17R89 818 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 C14orf28Q4W4Y0 310 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 NADSYN1Q6IA69 706 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 CEACAM20Q6UY09 585 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 SPNS3Q6ZMD2 512 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 BHLHA9Q7RTU4 235 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 GDF7Q7Z4P5 450 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 MTDHQ86UE4 582 aaKnown RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 APLFQ8IW19 511 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 MCEMP1Q8IX19 187 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 NRSN1Q8IZ57 195 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 LGI2Q8N0V4 545 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 CCAR2Q8N163 923 aaKnown RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 Q8N1Y9 231 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 PPM1KQ8N3J5 372 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 ESX1Q8N693 406 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 ATP11CQ8NB49 1132 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 OR4D9Q8NGE8 314 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 OR2A12Q8NGT7 310 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 PDCD6IPQ8WUM4 868 aaKnown RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 SEC14L1Q92503 715 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 ART4Q93070 314 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 HDAC11Q96DB2 347 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 BTN2A3PQ96KV6 586 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 JMJD8Q96S16 334 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 KLF6Q99612 283 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 FGFBP2Q9BYJ0 223 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 CDIP1Q9H305 208 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 TCEAL2Q9H3H9 227 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 SLAMF7Q9NQ25 335 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 SLAMF8Q9P0V8 285 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 ADGRE2Q9UHX3 823 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 FBXL7Q9UJT9 491 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 KCND3Q9UK17 655 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 TMEM59LQ9UK28 342 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 VPS28Q9UK41 221 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 TLK1Q9UKI8 766 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 PILRAQ9UKJ1 303 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 G3BP2Q9UN86 482 aaKnown RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 HS3ST2Q9Y278 367 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 PCDHGA9Q9Y5G4 932 aaKnown RBP4.12□□□□□ -1.75
SNHG1-220ENST00000544550 FADS3Q9Y5Q0 445 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 NOTCH2Q04721 2471 aa4.12□□□□□ -1.75
SNHG1-220ENST00000544550 TP53BP1Q12888 1972 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 CREBBPQ92793 2442 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 LRRK1Q38SD2 2015 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 hCG_2014768A0A024R1R8 64 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 IGHV5-10-1A0A0J9YXX1 117 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 LOC101059948A0A1B0GTJ6 334 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 IGLON5A6NGN9 336 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 RHPN2P1A8MT19 583 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 H3BQV1 296 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 K7EM74 188 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 SPTLC2O15270 562 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 DPM1O60762 260 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 FAM155BO75949 473 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 FBXO21O94952 628 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 MOCS2O96007 188 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 TNFP01375 233 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 HLA-DRAP01903 254 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 LTFP02788 710 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 THRAP10827 490 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 SLC2A3P11169 496 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 SRCP12931 536 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 SOX5P35711 763 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 FLT3P36888 993 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 BCL6P41182 706 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 GPR3P46089 330 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 CORO7P57737 925 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 RNASE9P60153 205 aaKnown RBP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 RPL11P62913 178 aaKnown RBP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 B4GALNT1Q00973 533 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 BIRC2Q13490 618 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 SEMA5AQ13591 1074 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 HLTFQ14527 1009 aaKnown RBP eCLIP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 NR1D2Q14995 579 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 KNOP1Q1ED39 458 aaKnown RBP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 AMZ1Q400G9 498 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 EFHC1Q5JVL4 640 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 FAM26FQ5R3K3 315 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 TPRG1LQ5T0D9 272 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 RAP1GAP2Q684P5 730 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 SP5Q6BEB4 398 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 SPOPLQ6IQ16 392 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms