RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 IL26Q9NPH9 171 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 FAM114A2Q9NRY5 505 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 NFKBIL1Q9UBC1 381 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 DMGDHQ9UI17 866 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 APPL1Q9UKG1 709 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SLC6A14Q9UN76 642 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SOX13Q9UN79 622 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ADAMTS9Q9P2N4 1935 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 A0A1B0GVT2 93 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 A0A1W2PR77 199 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MAGEB16A2A368 324 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TOR1BO14657 336 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 KHNYNO15037 678 aaKnown RBP14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 INPP4BO15327 924 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TP73O15350 636 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PRAMEF1O95521 474 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 YPEL5P62699 121 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 DHX9Q08211 1270 aaKnown RBP14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PTK2BQ14289 1009 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CHRNA6Q15825 494 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 BBS9Q3SYG4 887 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RUBCNQ92622 972 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ART4Q93070 314 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CDKN2AIPNLQ96HQ2 116 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ZNF778Q96MU6 729 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PWWP2AQ96N64 755 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 KIFC1Q9BW19 673 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MRM3Q9HC36 420 aaKnown RBP14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RRAGDQ9NQL2 400 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 FSCN3Q9NQT6 498 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PHPT1Q9NRX4 125 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SLC2A6Q9UGQ3 507 aa14.4□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MUC6Q6W4X9 2439 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FADS2P1A8MWK0 482 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 BANF1O75531 89 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SLU7O95391 586 aaKnown RBP14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SOD1P00441 154 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 MYCLP1P12525 358 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 HTR1BP28222 390 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 NMBRP28336 390 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TEAD1P28347 426 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 MC4RP32245 332 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TRIM23P36406 574 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PRAMEP78395 509 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CDK3Q00526 305 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ITGA9Q13797 1035 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 HLTFQ14527 1009 aaKnown RBP eCLIP14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ZRANB3Q5FWF4 1079 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PLA2G2CQ5R387 149 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 HP1BP3Q5SSJ5 553 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PDPK2PQ6A1A2 396 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TCEAL6Q6IPX3 200 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CES3Q6UWW8 571 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 DCP2Q8IU60 420 aaKnown RBP14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FBXO25Q8TCJ0 367 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 IFT81Q8WYA0 676 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TCEAL3Q969E4 200 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FUBP1Q96AE4 644 aaKnown RBP14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 STAMBPL1Q96FJ0 436 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 HIC2Q96JB3 615 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SIGLEC10Q96LC7 697 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TBATAQ96M53 351 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ASB8Q9H765 288 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SUDS3Q9H7L9 328 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CAPN10Q9HC96 672 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 RIMKLBQ9ULI2 386 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ANKRD6Q9Y2G4 727 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SLC30A1Q9Y6M5 507 aa14.39□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TMEM131Q92545 1883 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SRP72O76094 671 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SLC25A14O95258 325 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SYPP08247 313 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ZNF806P0C7X5 589 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PAMP19021 973 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ITGALP20701 1170 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 KELP23276 732 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ARSDP51689 593 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 IRX4P78413 519 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GRIK2Q13002 908 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PDIA2Q13087 525 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PEX6Q13608 980 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 NFATC4Q14934 902 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 KIF19Q2TAC6 998 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 MSS51Q4VC12 460 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ATP13A5Q4VNC0 1218 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ARMC3Q5W041 872 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ADAMTSL4Q6UY14 1074 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CENPUQ71F23 418 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ASCL5Q7RTU5 278 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SLC22A18ASQ8N1D0 253 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 DCLK2Q8N568 766 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 OR13J1Q8NGT2 312 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 OR6P1Q8NGX9 317 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GDAP1Q8TB36 358 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ZNF398Q8TD17 642 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SEC14L1Q92503 715 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PEX13Q92968 403 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 HDAC10Q969S8 669 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 MFSD3Q96ES6 412 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 LGR4Q9BXB1 951 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms