RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 PLEKHG6Q3KR16 790 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 PLPP4Q5VZY2 271 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 TLDC1Q6P9B6 456 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 LYSMD3Q7Z3D4 306 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 CEP70Q8NHQ1 597 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 PIH1D2Q8WWB5 315 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.99■□□□□ 0.31
PTPRO-209ENST00000543886 MAELQ96JY0 434 aaKnown RBP16.99■□□□□ 0.31
PTPRO-209ENST00000543886 BIRC8Q96P09 236 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 LENG8Q96PV6 779 aaPredicted RBP16.99■□□□□ 0.31
PTPRO-209ENST00000543886 RTKNQ9BST9 563 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 IL17CQ9P0M4 197 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 SLC7A8Q9UHI5 535 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 TRMT6Q9UJA5 497 aaKnown RBP16.99■□□□□ 0.31
PTPRO-209ENST00000543886 RNF112Q9ULX5 631 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 CLEC4EQ9ULY5 219 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 C15orf41Q9Y2V0 281 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 MED16Q9Y2X0 877 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 SLC30A1Q9Y6M5 507 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 HELZP42694 1942 aaKnown RBP16.99■□□□□ 0.31
PTPRO-209ENST00000543886 A0A0U1RQS6 177 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 RGSL1A5PLK6 1076 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 NRG2O14511 850 aaPredicted RBP16.98■□□□□ 0.31
PTPRO-209ENST00000543886 KERAO60938 352 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 ALPIP09923 528 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 GFAPP14136 432 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 HMGCLP35914 325 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 CSNK1DP48730 415 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 BTKQ06187 659 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 CACNG1Q06432 222 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 RCN1Q15293 331 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 CCDC6Q16204 474 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 ACCSLQ4AC99 568 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 UNC50Q53HI1 259 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 C1orf146Q5VVC0 180 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 TMEM198Q66K66 360 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 NKAPQ8N5F7 415 aaKnown RBP16.98■□□□□ 0.31
PTPRO-209ENST00000543886 STAG3L4Q8TBR4 150 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 KCNV2Q8TDN2 545 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 KIAA1191Q96A73 305 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 ZNF385DQ9H6B1 395 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 ABCB8Q9NUT2 735 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 SUFUQ9UMX1 484 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 COMMD10Q9Y6G5 202 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 LAMA2P24043 3122 aaKnown RBP16.98■□□□□ 0.31
PTPRO-209ENST00000543886 A0A088AWK7 358 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 SUPT3HB4E1H0 165 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 OR1I1O60431 355 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 SUPT3HO75486 399 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 KRT36O76013 467 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 PSMG1O95456 288 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 ITGAXP20702 1163 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 CTNNB1P35222 781 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 PTGER3P43115 390 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 CLNS1AP54105 237 aaKnown RBP16.98■□□□□ 0.31
PTPRO-209ENST00000543886 ERVFC1P60507 584 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 PFKFB4Q16877 469 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 RIPOR1Q6ZS17 1223 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 SNX32Q86XE0 403 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 STK40Q8N2I9 435 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 CFAP61Q8NHU2 1237 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 ASB2Q96Q27 587 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 ATOH8Q96SQ7 321 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 ATP13A3Q9H7F0 1226 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 MEAF6Q9HAF1 191 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 HCFC1R1Q9NWW0 138 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 TRAF6Q9Y4K3 522 aa16.98■□□□□ 0.31
PTPRO-209ENST00000543886 E5RI56 91 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 SOCS5O75159 536 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 NIPSNAP2O75323 286 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 FGF19O95750 216 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 GNAZP19086 355 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 CLCN4P51793 760 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 CYLC2Q14093 348 aaPredicted RBP16.97■□□□□ 0.31
PTPRO-209ENST00000543886 SETMARQ53H47 684 aaPredicted RBP16.97■□□□□ 0.31
PTPRO-209ENST00000543886 CTSL3PQ5NE16 218 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 DEFB107AQ8IZN7 70 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 CMTM8Q8IZV2 173 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 RP9Q8TA86 221 aaKnown RBP16.97■□□□□ 0.31
PTPRO-209ENST00000543886 ACTRT2Q8TDY3 377 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 MIEF2Q96C03 454 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 MARK4Q96L34 752 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 TNKS2Q9H2K2 1166 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 TNFRSF12AQ9NP84 129 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 PRKAG2Q9UGJ0 569 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 IRAK3Q9Y616 596 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 C1orf232A0A0U1RR37 186 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 SYCE1LA8MT33 242 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 HIDE1A8MVS5 230 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 UBFD1O14562 309 aaKnown RBP16.97■□□□□ 0.31
PTPRO-209ENST00000543886 HTRA2O43464 458 aaPredicted RBP16.97■□□□□ 0.31
PTPRO-209ENST00000543886 PRAMEF12O95522 483 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 ESR1P03372 595 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 TSPAN8P19075 237 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 CCR2P41597 374 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 XIAPP98170 497 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 FPGSQ05932 587 aa16.97■□□□□ 0.31
PTPRO-209ENST00000543886 MRPL43Q8N983 215 aaKnown RBP16.97■□□□□ 0.31
PTPRO-209ENST00000543886 SIDT2Q8NBJ9 832 aaKnown RBP16.97■□□□□ 0.31
PTPRO-209ENST00000543886 SHKBP1Q8TBC3 707 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms