RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 DEFB129Q9H1M3 183 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 DPP3Q9NY33 737 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 TTC24A2A3L6 582 aaPredicted RBP12.64□□□□□ -0.39
SMG8-202ENST00000543872 YDJCA8MPS7 323 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 A8MT66 165 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 LACTBL1A8MY62 500 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 H0YAE9 185 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 FXYD1O00168 92 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 SOAT2O75908 522 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 AP2A1O95782 977 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 HSD17B1P14061 328 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 CASP3P42574 277 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 CD47Q08722 323 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 TJAP1Q5JTD0 557 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 RBM48Q5RL73 367 aaKnown RBP12.64□□□□□ -0.39
SMG8-202ENST00000543872 CHDHQ8NE62 594 aaPredicted RBP12.64□□□□□ -0.39
SMG8-202ENST00000543872 RPL3LQ92901 407 aaKnown RBP12.64□□□□□ -0.39
SMG8-202ENST00000543872 TUBGCP3Q96CW5 907 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 GPRASP2Q96D09 838 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 VMP1Q96GC9 406 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 TMEM134Q9H6X4 195 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 SIPA1L1O43166 1804 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 PPP6CO00743 305 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 ALOX12P18054 663 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 CD68P34810 354 aaPredicted RBP12.64□□□□□ -0.39
SMG8-202ENST00000543872 SP2Q02086 613 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 LAPTM5Q13571 262 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 CTU2Q2VPK5 515 aaKnown RBP12.64□□□□□ -0.39
SMG8-202ENST00000543872 LCLAT1Q6UWP7 414 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 HACD2Q6Y1H2 254 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 FAM83FQ8NEG4 500 aaPredicted RBP12.64□□□□□ -0.39
SMG8-202ENST00000543872 ZNF555Q8NEP9 628 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 MCFD2Q8NI22 146 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 MUL1Q969V5 352 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 C19orf60Q96EN9 201 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 COQ7Q99807 217 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 NT5C1AQ9BXI3 368 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 C6orf62Q9GZU0 229 aaPredicted RBP12.64□□□□□ -0.39
SMG8-202ENST00000543872 TMEM39BQ9GZU3 492 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 C2orf40Q9H1Z8 148 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 PLEKHA5Q9HAU0 1116 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 CCDC177Q9NQR7 707 aaPredicted RBP12.64□□□□□ -0.39
SMG8-202ENST00000543872 GIMAP4Q9NUV9 329 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 SLAMF8Q9P0V8 285 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 BTRCQ9Y297 605 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 TESMINQ9Y4I5 508 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 TBKBP1A7MCY6 615 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 DPYSL4O14531 572 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 GNGT2O14610 69 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 IPO13O94829 963 aaKnown RBP12.63□□□□□ -0.39
SMG8-202ENST00000543872 GLULP15104 373 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 NFKB1P19838 968 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 PRKACGP22612 351 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 PTPN3P26045 913 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 ADORA2BP29275 332 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 SMU1Q2TAY7 513 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 UGT3A2Q3SY77 523 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 SNAP47Q5SQN1 464 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 LARP4Q71RC2 724 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMG8-202ENST00000543872 ZBTB8OSQ8IWT0 167 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 MIER2Q8N344 545 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 OR13J1Q8NGT2 312 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 RNF139Q8WU17 664 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 ASPSCR1Q9BZE9 553 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 PRDM8Q9NQV8 689 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 NUP205Q92621 2012 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 UBFD1O14562 309 aaKnown RBP12.63□□□□□ -0.39
SMG8-202ENST00000543872 ITGB6P18564 788 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 PIGAP37287 484 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 ALDH3A2P51648 485 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 PPP5CP53041 499 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 PITX1P78337 314 aaPredicted RBP12.63□□□□□ -0.39
SMG8-202ENST00000543872 PRMT9Q6P2P2 845 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 LYSMD2Q8IV50 215 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 SLC22A15Q8IZD6 547 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 DTX3Q8N9I9 347 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 TRIB2Q92519 343 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 SLC10A4Q96EP9 437 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 REXO4Q9GZR2 422 aaKnown RBP12.63□□□□□ -0.39
SMG8-202ENST00000543872 ADPRHL2Q9NX46 363 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 CAB39Q9Y376 341 aaPredicted RBP12.63□□□□□ -0.39
SMG8-202ENST00000543872 M0QX08 132 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 HADHAP40939 763 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 AMHR2Q16671 573 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 ATF7IP2Q5U623 682 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 STRIP1Q5VSL9 837 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 STEAP3Q658P3 488 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 ESRP1Q6NXG1 681 aaKnown RBP12.63□□□□□ -0.39
SMG8-202ENST00000543872 STRADAQ7RTN6 431 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 ZDHHC13Q8IUH4 622 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 HDAC2Q92769 488 aaKnown RBP12.63□□□□□ -0.39
SMG8-202ENST00000543872 C2orf49Q9BVC5 232 aaPredicted RBP12.63□□□□□ -0.39
SMG8-202ENST00000543872 DSN1Q9H410 356 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 CPNE5Q9HCH3 593 aa12.63□□□□□ -0.39
SMG8-202ENST00000543872 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.63□□□□□ -0.39
SMG8-202ENST00000543872 PCM1Q15154 2024 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 LINC00032P0C843 101 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 EMX1Q04741 257 aaPredicted RBP12.62□□□□□ -0.39
SMG8-202ENST00000543872 FAM214AQ32MH5 1076 aa12.62□□□□□ -0.39
SMG8-202ENST00000543872 RBM20Q5T481 1227 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms