RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 MSH3P20585 1137 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 ITGALP20701 1170 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 AKT1P31749 480 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 MC4RP32245 332 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 PLA2G5P39877 138 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 CCT8P50990 548 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 ARL4CP56559 192 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 NXPH1P58417 271 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 DCDC1P59894 354 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 PFN3P60673 137 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 PRAMEP78395 509 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 CRADDP78560 199 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 CDK3Q00526 305 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 IL9RQ01113 521 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 SLC7A5Q01650 507 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 GUCY2DQ02846 1103 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 PPARDQ03181 441 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 DPTQ07507 201 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 GTF2H3Q13889 308 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 PTPRCAPQ14761 206 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 MORF4L2Q15014 288 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 TCEA2Q15560 299 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 CHRNA6Q15825 494 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 HLA-BQ31612 363 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 BBS9Q3SYG4 887 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 ZNF542PQ5EBM4 170 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 DNAJC21Q5F1R6 531 aaKnown RBP6.28□□□□□ -1.4
LTBR-212ENST00000543542 TSTD2Q5T7W7 516 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 RNASEH2BQ5TBB1 312 aaKnown RBP6.28□□□□□ -1.4
LTBR-212ENST00000543542 KDM7AQ6ZMT4 941 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 MACC1Q6ZN28 852 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 MARK2Q7KZI7 788 aaKnown RBP6.28□□□□□ -1.4
LTBR-212ENST00000543542 ZNF572Q7Z3I7 529 aaPredicted RBP6.28□□□□□ -1.4
LTBR-212ENST00000543542 ABI3BPQ7Z7G0 1075 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 ALYREFQ86V81 257 aaKnown RBP6.28□□□□□ -1.4
LTBR-212ENST00000543542 HOOK3Q86VS8 718 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 PARGQ86W56 976 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 PHYKPLQ8IUZ5 450 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 HID1Q8IV36 788 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 PDIK1LQ8N165 341 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 MINDY1Q8N5J2 469 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 TRAM1L1Q8N609 369 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 NAT8LQ8N9F0 302 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 TMEM145Q8NBT3 493 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 MCUQ8NE86 351 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 OR56A4Q8NGH8 313 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 OR2I1PQ8NGU4 316 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 OR6P1Q8NGX9 317 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 C1orf216Q8TAB5 229 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 ZNF398Q8TD17 642 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 BTN2A2Q8WVV5 523 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.28□□□□□ -1.4
LTBR-212ENST00000543542 FUBP1Q96AE4 644 aaKnown RBP6.28□□□□□ -1.4
LTBR-212ENST00000543542 EID2BQ96D98 161 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 HIC2Q96JB3 615 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 DNAJC1Q96KC8 554 aaKnown RBP6.28□□□□□ -1.4
LTBR-212ENST00000543542 WDR92Q96MX6 357 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 SERPINB12Q96P63 405 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 PLEKHG4BQ96PX9 1271 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 RANBP9Q96S59 729 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 AGAP2Q99490 1192 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 TTC1Q99614 292 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 ORAI3Q9BRQ5 295 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 ERP44Q9BS26 406 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 LRRC1Q9BTT6 524 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 FRMD8Q9BZ67 464 aaPredicted RBP6.28□□□□□ -1.4
LTBR-212ENST00000543542 SLC13A1Q9BZW2 595 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 ASB8Q9H765 288 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 CAPN10Q9HC96 672 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 ARFGAP3Q9NP61 516 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 PARD6AQ9NPB6 346 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 TMEM9BQ9NQ34 198 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 NLE1Q9NVX2 485 aaPredicted RBP6.28□□□□□ -1.4
LTBR-212ENST00000543542 SYBUQ9NX95 663 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 CRLS1Q9UJA2 301 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 DOLKQ9UPQ8 538 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 NEU2Q9Y3R4 380 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 TCAF1Q9Y4C2 921 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 GPSM3Q9Y4H4 160 aa6.28□□□□□ -1.4
LTBR-212ENST00000543542 SPTY2D1-AS1A0A0U1RR47 76 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 LNP1A1A4G5 178 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 MAGEB16A2A368 324 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 C4orf47A7E2U8 309 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 FADS2P1A8MWK0 482 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 SCAMP1O15126 338 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 YKT6O15498 198 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 LDB2O43679 373 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 UGT1A9O60656 530 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 SDC3O75056 442 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 SRP72O76094 671 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 SEC31AO94979 1220 aaKnown RBP6.27□□□□□ -1.41
LTBR-212ENST00000543542 RASGRP1O95267 797 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 POLBP06746 335 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 RALBP11234 206 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 JUNDP17535 347 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 UGT1A6P19224 532 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 UGT1A1P22309 533 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 UGT1A4P22310 534 aa6.27□□□□□ -1.41
LTBR-212ENST00000543542 TEAD1P28347 426 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms