RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 MRPL46Q9H2W6 279 aaKnown RBP10.56□□□□□ -0.72
CALU-206ENST00000542996 ZNF696Q9H7X3 374 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 SLC6A14Q9UN76 642 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 PCDHGC4Q9Y5F7 938 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 KIAA1549LQ6ZVL6 1849 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 RRN3P2A6NIE6 340 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 OR7A17O14581 309 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 TAPBPO15533 448 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 SEC24AO95486 1093 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 SNAP29O95721 258 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 LMNAP02545 664 aaKnown RBP10.56□□□□□ -0.72
CALU-206ENST00000542996 GDF5P43026 501 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 XIAPP98170 497 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 IFITM3Q01628 133 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 PMS2P3Q13401 168 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 RFTN2Q52LD8 501 aaPredicted RBP10.56□□□□□ -0.72
CALU-206ENST00000542996 XKR7Q5GH72 579 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 ATXN7L2Q5T6C5 722 aaPredicted RBP10.56□□□□□ -0.72
CALU-206ENST00000542996 KIAA0930Q6ICG6 404 aaPredicted RBP10.56□□□□□ -0.72
CALU-206ENST00000542996 NAPEPLDQ6IQ20 393 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 CXorf57Q6NSI4 855 aaKnown RBP10.56□□□□□ -0.72
CALU-206ENST00000542996 SPATA24Q86W54 205 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 EXOC8Q8IYI6 725 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 PABPC5Q96DU9 382 aaKnown RBP10.56□□□□□ -0.72
CALU-206ENST00000542996 ERLEC1Q96DZ1 483 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 CMTM5Q96DZ9 223 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 SAMD11Q96NU1 681 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 ABI2Q9NYB9 513 aaPredicted RBP10.56□□□□□ -0.72
CALU-206ENST00000542996 TSR3Q9UJK0 312 aaKnown RBP10.56□□□□□ -0.72
CALU-206ENST00000542996 PRDX6P30041 224 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 NPY2RP49146 381 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 RPS6KA3P51812 740 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 TXNL4AP83876 142 aaKnown RBP10.56□□□□□ -0.72
CALU-206ENST00000542996 EEF1AKMT1Q8WVE0 214 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 L3HYPDHQ96EM0 354 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 ABCG8Q9H221 673 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 AGPAT4Q9NRZ5 378 aa10.56□□□□□ -0.72
CALU-206ENST00000542996 HNRNPRO43390 633 aaKnown RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 ZNF623O75123 536 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 SLC4A1P02730 911 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 MATN1P21941 496 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 THPOP40225 353 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 SERINC3Q13530 473 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 DBN1Q16643 649 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 CTU2Q2VPK5 515 aaKnown RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 PRSS55Q6UWB4 352 aaPredicted RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 TSEN54Q7Z6J9 526 aaKnown RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 GALNT10Q86SR1 603 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 PDCD6IPQ8WUM4 868 aaKnown RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 UBE2FQ969M7 185 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 HSPBAP1Q96EW2 488 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 SUSD3Q96L08 255 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 C1orf50Q9BV19 199 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 SLC45A1Q9Y2W3 748 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 DTNAQ9Y4J8 743 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 ATG2AQ2TAZ0 1938 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 C2orf78A6NCI8 922 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 NCF1BA6NI72 391 aaPredicted RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 GOLGA8CPA6NN73 597 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 NCF1CA8MVU1 366 aaPredicted RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 WASH4PA8MWX3 477 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 SKIP12755 728 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 NCF1P14598 390 aaPredicted RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 STMN1P16949 149 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 IMPDH1P20839 514 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 PRKCZQ05513 592 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 LAPTM5Q13571 262 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 FXNQ16595 210 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 PFKFB4Q16877 469 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 KANK2Q63ZY3 851 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 SPRED2Q7Z698 418 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 CCDC71Q8IV32 467 aaPredicted RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 STMN2Q93045 179 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 DUS3LQ96G46 650 aaKnown RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 TMEM184CQ9NVA4 438 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 EXD2Q9NVH0 621 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.55□□□□□ -0.72
CALU-206ENST00000542996 ANKRD6Q9Y2G4 727 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 SMAD6O43541 496 aaKnown RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 AKAP10O43572 662 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 TPST1O60507 370 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 SNAP91O60641 907 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 PIK3CGP48736 1102 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 CCT8P50990 548 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 SCNN1BP51168 640 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 DGKQP52824 942 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 MESP2Q0VG99 397 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 RFTN1Q14699 578 aaPredicted RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 FGD3Q5JSP0 725 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 SLC2A7Q6PXP3 512 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 BNC2Q6ZN30 1099 aaPredicted RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 RIMKLAQ8IXN7 391 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 SFRP1Q8N474 314 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 SIDT2Q8NBJ9 832 aaKnown RBP10.55□□□□□ -0.72
CALU-206ENST00000542996 TRPC4APQ8TEL6 797 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 EXT2Q93063 718 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 MPP4Q96JB8 637 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 RRAGCQ9HB90 399 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 CDY1Q9Y6F8 540 aa10.55□□□□□ -0.72
CALU-206ENST00000542996 SVEP1Q4LDE5 3571 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms