RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 FAM72DQ6L9T8 149 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 C16orf59Q7L2K0 433 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 NECAB2Q7Z6G3 386 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 KBTBD6Q86V97 674 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 FAM72BQ86X60 149 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 CFAP52Q8N1V2 620 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 STX19Q8N4C7 294 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 CHID1Q9BWS9 393 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 AKTIPQ9H8T0 292 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 SLC27A5Q9Y2P5 690 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 U3KQV3 271 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 FZD9O00144 591 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 PIRO00625 290 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 HLA-DQB2P05538 268 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 FAM163BP0C2L3 166 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 KCNE1P15382 129 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 NCK1P16333 377 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 CXCR3P49682 368 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 IKBKEQ14164 716 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 CPSF6Q16630 551 aaKnown RBP eCLIP8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 RFX4Q33E94 735 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 SPDYE7PQ495Y7 208 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 TIGD5Q53EQ6 642 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 RBM20Q5T481 1227 aaKnown RBP8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 THAP5Q7Z6K1 395 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 ZNF554Q86TJ5 538 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 OSTM1Q86WC4 334 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 TRIM69Q86WT6 500 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 MARVELD2Q8N4S9 558 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 ATAD1Q8NBU5 361 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 BRSK1Q8TDC3 778 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 MCOLN3Q8TDD5 553 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 ESAMQ96AP7 390 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 TPD52L3Q96J77 140 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 ZNF778Q96MU6 729 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 FAM210AQ96ND0 272 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 OR52E6Q96RD3 313 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 HBEGFQ99075 208 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 REEP1Q9H902 201 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 CACNA2D2Q9NY47 1150 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 PCDHB9Q9Y5E1 797 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 PRRC2BQ5JSZ5 2229 aaKnown RBP8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 RGPD3A6NKT7 1758 aaPredicted RBP8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 RGPD4Q7Z3J3 1758 aa8.18□□□□□ -1.1
PRKAB1-207ENST00000542698 A8MX80 341 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 EI24O14681 340 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 KRT75O95678 551 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 IQCF3P0C7M6 154 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 DDX5P17844 614 aaKnown RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 MC4RP32245 332 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 SOAT1P35610 550 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 SOX6P35712 828 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 TUFMP49411 452 aaKnown RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 NDST2P52849 883 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 HERVK_113P63132 956 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 BCL2L1Q07817 233 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 TSNQ15631 228 aaKnown RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 PARP15Q460N3 678 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 TMEM214Q6NUQ4 689 aaKnown RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 ZNF549Q6P9A3 640 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 TXNDC5Q8NBS9 432 aaKnown RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 MAPK15Q8TD08 544 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 HMCESQ96FZ2 354 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 ERVK-6Q9BXR3 956 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 C6orf62Q9GZU0 229 aaPredicted RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 PREBQ9HCU5 417 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 CD320Q9NPF0 282 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 OAZ3Q9UMX2 235 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 OR51F1A6NGY5 319 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 ARL5CA6NH57 179 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 BTBD19C9JJ37 291 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 PRMT5O14744 637 aaPredicted RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 ARHGEF9O43307 516 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 ASLP04424 464 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 UROSP10746 265 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 THRBP10828 461 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 MTHFRP42898 656 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 PGGT1BP53609 377 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 NRG1Q02297 640 aaPredicted RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 ZNF33AQ06730 810 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 HSPA14Q0VDF9 509 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 TAF10Q12962 218 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 HIST2H2ACQ16777 129 aaPredicted RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 CCNYL2Q5T2Q4 361 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 HIST2H2AA3Q6FI13 130 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 RPS27LQ71UM5 84 aaKnown RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 BNIPLQ7Z465 357 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 CTU1Q7Z7A3 348 aaKnown RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 SLC44A2Q8IWA5 706 aaPredicted RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 EMID1Q96A84 441 aaPredicted RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 LRRC58Q96CX6 371 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 TMEM169Q96HH4 297 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 SMOQ99835 787 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 C20orf27Q9GZN8 174 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 DNMT3LQ9UJW3 386 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 AGO1Q9UL18 857 aaKnown RBP8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 GMPPBQ9Y5P6 360 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 F8W810 466 aa8.17□□□□□ -1.1
PRKAB1-207ENST00000542698 RNASEH2AO75792 299 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms