RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 PTCH2Q9Y6C5 1203 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 DGKBQ9Y6T7 804 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 NOL3O60936 208 aaKnown RBP15.28■□□□□ 0.04
CNOT9-208ENST00000542068 FLT3LGP49771 235 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 TPD52P55327 224 aaPredicted RBP15.28■□□□□ 0.04
CNOT9-208ENST00000542068 ADAM17P78536 824 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 GALNT3Q14435 633 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 TIGD2Q4W5G0 525 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 ZC3H7AQ8IWR0 971 aaKnown RBP15.28■□□□□ 0.04
CNOT9-208ENST00000542068 TEX37Q96LM6 180 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 RTP3Q9BQQ7 232 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 ING2Q9H160 280 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 CCM2LQ9NUG4 571 aaPredicted RBP15.28■□□□□ 0.04
CNOT9-208ENST00000542068 ABT1Q9ULW3 272 aaKnown RBP15.28■□□□□ 0.04
CNOT9-208ENST00000542068 OTOFQ9HC10 1997 aa15.28■□□□□ 0.04
CNOT9-208ENST00000542068 IRAK2O43187 625 aa15.27■□□□□ 0.04
CNOT9-208ENST00000542068 CDK14O94921 469 aa15.27■□□□□ 0.04
CNOT9-208ENST00000542068 HAPLN1P10915 354 aaPredicted RBP15.27■□□□□ 0.04
CNOT9-208ENST00000542068 VARSP26640 1264 aaKnown RBP15.27■□□□□ 0.04
CNOT9-208ENST00000542068 ZNF678Q5SXM1 525 aa15.27■□□□□ 0.04
CNOT9-208ENST00000542068 MARC1Q5VT66 337 aa15.27■□□□□ 0.04
CNOT9-208ENST00000542068 ABI1Q8IZP0 508 aa15.27■□□□□ 0.04
CNOT9-208ENST00000542068 ANKFN1Q8N957 763 aa15.27■□□□□ 0.04
CNOT9-208ENST00000542068 HMCESQ96FZ2 354 aa15.27■□□□□ 0.04
CNOT9-208ENST00000542068 FCRL5Q96RD9 977 aa15.27■□□□□ 0.04
CNOT9-208ENST00000542068 KCTD14Q9BQ13 255 aaPredicted RBP15.27■□□□□ 0.04
CNOT9-208ENST00000542068 RPF2Q9H7B2 306 aaKnown RBP15.27■□□□□ 0.04
CNOT9-208ENST00000542068 GABRQQ9UN88 632 aa15.27■□□□□ 0.04
CNOT9-208ENST00000542068 RAD54BQ9Y620 910 aa15.27■□□□□ 0.04
CNOT9-208ENST00000542068 SQORQ9Y6N5 450 aa15.27■□□□□ 0.04
CNOT9-208ENST00000542068 SLC12A8A0AV02 714 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 ITGADQ13349 1161 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 BFSP2Q13515 415 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 PCBP1Q15365 356 aaKnown RBP eCLIP15.27■□□□□ 0.03
CNOT9-208ENST00000542068 ALFQ53S48 1182 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 GRAMD4Q6IC98 578 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 TBPL2Q6SJ96 375 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 ISCA2Q86U28 154 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 BBS5Q8N3I7 341 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 HM13Q8TCT9 377 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 RSPH1Q8WYR4 309 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 LRRC58Q96CX6 371 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 FANCEQ9HB96 536 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 GMIPQ9P107 970 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 UXTQ9UBK9 157 aaPredicted RBP15.27■□□□□ 0.03
CNOT9-208ENST00000542068 GMEB1Q9Y692 573 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 SH3PXD2BA1X283 911 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 BMP10O95393 424 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 OCM2P0CE71 109 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 OCMP0CE72 109 aaPredicted RBP15.27■□□□□ 0.03
CNOT9-208ENST00000542068 BMP2P12643 396 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 DNAJB13P59910 316 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 KCNA10Q16322 511 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 IMPG1Q17R60 797 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 GLB1LQ6UWU2 654 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 RMDN1Q96DB5 314 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 DGCR6LQ9BY27 220 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 ENTPD7Q9NQZ7 604 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 ABCC13Q9NSE7 274 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 EXD2Q9NVH0 621 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 HS3ST4Q9Y661 456 aa15.27■□□□□ 0.03
CNOT9-208ENST00000542068 BRCA1P38398 1863 aaKnown RBP15.26■□□□□ 0.03
CNOT9-208ENST00000542068 A0A0U1RQS6 177 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 ENPP3O14638 875 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 AZIN1O14977 448 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 HOXD8P13378 290 aaPredicted RBP15.26■□□□□ 0.03
CNOT9-208ENST00000542068 IMPDH1P20839 514 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 SLC6A2P23975 617 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 PRDX3P30048 256 aaKnown RBP15.26■□□□□ 0.03
CNOT9-208ENST00000542068 HMOX2P30519 316 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 SERPINH1P50454 418 aaKnown RBP15.26■□□□□ 0.03
CNOT9-208ENST00000542068 CSRP3P50461 194 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 IST1P53990 364 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 TBX4P57082 545 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 PHEXP78562 749 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 LIPEQ05469 1076 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 SCAPQ12770 1279 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 BNIPLQ7Z465 357 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 CLYBLQ8N0X4 340 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 UPF1Q92900 1129 aaKnown RBP eCLIP15.26■□□□□ 0.031e-6■■■■□ 21.6
CNOT9-208ENST00000542068 TRIM15Q9C019 465 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 TREX1Q9NSU2 369 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 HHLA1C9JL84 531 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 MATN3O15232 486 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 PSMD3O43242 534 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 IMPDH2P12268 514 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 GSK3BP49841 420 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 CRHR2Q13324 411 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 OR4D1Q15615 310 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 UGT3A2Q3SY77 523 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 MORN1Q5T089 497 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 SNX29P2Q8IUI4 249 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 ADGRG5Q8IZF4 528 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 CLEC4FQ8N1N0 589 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 LZTR1Q8N653 840 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 TRPV1Q8NER1 839 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 FBXO32Q969P5 355 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 CCDC126Q96EE4 140 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 ACBD6Q9BR61 282 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 C9orf16Q9BUW7 83 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms