RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TBATAQ96M53 351 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 FICDQ9BVA6 458 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 BOCQ9BWV1 1114 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 TMEM121BQ9BXQ6 578 aaPredicted RBP9.68□□□□□ -0.86
YBX3-212ENST00000542002 CARD9Q9H257 536 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 ARFGAP3Q9NP61 516 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 KCTD5Q9NXV2 234 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 ANGPTL2Q9UKU9 493 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 SUFUQ9UMX1 484 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 APOBEC2Q9Y235 224 aaKnown RBP9.68□□□□□ -0.86
YBX3-212ENST00000542002 PRKAB1Q9Y478 270 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 KCTD3Q9Y597 815 aa9.68□□□□□ -0.86
YBX3-212ENST00000542002 FRYQ5TBA9 3013 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 RGSL1A5PLK6 1076 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 FAM149AA5PLN7 773 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 GOLGA6L9A6NEM1 432 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 GAPDHSO14556 408 aaPredicted RBP9.67□□□□□ -0.86
YBX3-212ENST00000542002 TPP1O14773 563 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 FGGP02679 453 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 SLC4A1P02730 911 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 PTMAP06454 111 aaKnown RBP9.67□□□□□ -0.86
YBX3-212ENST00000542002 ZSCAN5DPP0CG00 497 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 SMAD1Q15797 465 aaKnown RBP9.67□□□□□ -0.86
YBX3-212ENST00000542002 PARP6Q2NL67 630 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 INAVAQ3KP66 663 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 KHDC1Q4VXA5 237 aaKnown RBP9.67□□□□□ -0.86
YBX3-212ENST00000542002 SEL1L2Q5TEA6 688 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 ALS2CLQ60I27 953 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 ITPRIPL1Q6GPH6 555 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 CCDC70Q6NSX1 233 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 DOK6Q6PKX4 331 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 TMPRSS7Q7RTY8 843 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 SLC35F3Q8IY50 421 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 CCHCR1Q8TD31 782 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 UBE2Q2Q8WVN8 375 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 CNTNAP3BQ96NU0 1288 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 ALS2CR12Q96Q35 445 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 CNTNAP3Q9BZ76 1288 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 GPR63Q9BZJ6 419 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 SUDS3Q9H7L9 328 aaPredicted RBP9.67□□□□□ -0.86
YBX3-212ENST00000542002 CARS2Q9HA77 564 aaKnown RBP9.67□□□□□ -0.86
YBX3-212ENST00000542002 IL26Q9NPH9 171 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 PHPT1Q9NRX4 125 aaPredicted RBP9.67□□□□□ -0.86
YBX3-212ENST00000542002 SPATS2LQ9NUQ6 558 aaKnown RBP9.67□□□□□ -0.86
YBX3-212ENST00000542002 PKD2L2Q9NZM6 624 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 IL17CQ9P0M4 197 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 MOSPD1Q9UJG1 213 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 PYCARDQ9ULZ3 195 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 ARL5AQ9Y689 179 aa9.67□□□□□ -0.86
YBX3-212ENST00000542002 ARID1BQ8NFD5 2236 aaPredicted RBP9.66□□□□□ -0.86
YBX3-212ENST00000542002 BPTFQ12830 3046 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 PDE2AO00408 941 aaPredicted RBP9.66□□□□□ -0.86
YBX3-212ENST00000542002 GPR39O43194 453 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 CEP104O60308 925 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 UGT1A9O60656 530 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 DNAJC6O75061 913 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 ANXA9O76027 345 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 TRIM16O95361 564 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 CAPNS1P04632 268 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 FGF1P05230 155 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 IVLP07476 585 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 CTSEP14091 401 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 TPH1P17752 444 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 UGT1A6P19224 532 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 HLA-DPA1P20036 260 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 UGT1A1P22309 533 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 UGT1A4P22310 534 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 AK4P27144 223 aaPredicted RBP9.66□□□□□ -0.86
YBX3-212ENST00000542002 UGT1A3P35503 534 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 UGT1A5P35504 534 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 HMGCLP35914 325 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 ADCY8P40145 1251 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 GNPDA1P46926 289 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 KCNJ1P48048 391 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 BLKP51451 505 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 GEMP55040 296 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 INSM1Q01101 510 aaPredicted RBP9.66□□□□□ -0.86
YBX3-212ENST00000542002 GSE1Q14687 1217 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 CCNG2Q16589 344 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 ATP13A5Q4VNC0 1218 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 PYCR3Q53H96 274 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 ZNF569Q5MCW4 686 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 PERM1Q5SV97 790 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 C6orf132Q5T0Z8 1188 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 ZCCHC8Q6NZY4 707 aaKnown RBP9.66□□□□□ -0.86
YBX3-212ENST00000542002 GUSBP11Q6P575 273 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 OGFOD3Q6PK18 319 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 LVRNQ6Q4G3 990 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 CCNI2Q6ZMN8 369 aaPredicted RBP9.66□□□□□ -0.86
YBX3-212ENST00000542002 MARK2Q7KZI7 788 aaKnown RBP9.66□□□□□ -0.86
YBX3-212ENST00000542002 SLC35F6Q8N357 371 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 FSTL5Q8N475 847 aaPredicted RBP9.66□□□□□ -0.86
YBX3-212ENST00000542002 PDCD7Q8N8D1 485 aaKnown RBP9.66□□□□□ -0.86
YBX3-212ENST00000542002 PRELID2Q8N945 189 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 BLOC1S5Q8TDH9 187 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 GPBAR1Q8TDU6 330 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 DUSP23Q9BVJ7 150 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 SPATA16Q9BXB7 569 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 UGT1A7Q9HAW7 530 aa9.66□□□□□ -0.86
YBX3-212ENST00000542002 UGT1A10Q9HAW8 530 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms