RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-206	ENST00000541836	UMPS	P11172	480 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	TCEA1	P23193	301 aa	Known RBP	13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	DNAJB2	P25686	324 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	DAG1	Q14118	895 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	MEP1A	Q16819	746 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	FAM187B	Q17R55	369 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	PAGE2B	Q5JRK9	111 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	RBM48	Q5RL73	367 aa	Known RBP	13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	MINDY2	Q8NBR6	621 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	TWIST2	Q8WVJ9	160 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	KCNA7	Q96RP8	456 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	CGREF1	Q99674	301 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	CTRC	Q99895	268 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	CCDC90B	Q9GZT6	254 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	MID1IP1	Q9NPA3	183 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	ANKMY1	Q9P2S6	941 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	ERVK-11	Q9UQG0	969 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	BTRC	Q9Y297	605 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	PTGES3L	E9PB15	166 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	CLDN5	O00501	218 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	AXIN1	O15169	862 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	MAN1A2	O60476	641 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	UGT2B11	O75310	529 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	INMT	O95050	263 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	PAM	P19021	973 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	ALDH4A1	P30038	563 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	CHRNA4	P43681	627 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	DIO3	P55073	304 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	LSM3	P62310	102 aa	Known RBP	13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	CLC	Q05315	142 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	ACAP2	Q15057	778 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	CARTPT	Q16568	116 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	CTF1	Q16619	201 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	DPY19L1	Q2PZI1	675 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	AASDH	Q4L235	1098 aa	Predicted RBP	13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	UNC50	Q53HI1	259 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	PLEKHG7	Q6ZR37	379 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	CATSPER4	Q7RTX7	472 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	PTRH1	Q86Y79	214 aa	Known RBP	13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	S100Z	Q8WXG8	99 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	TMBIM1	Q969X1	311 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	NFKBIZ	Q9BYH8	718 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	NTN4	Q9HB63	628 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	SDR39U1	Q9NRG7	319 aa	Predicted RBP	13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	HOXC10	Q9NYD6	342 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	SLAMF8	Q9P0V8	285 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	KL	Q9UEF7	1012 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	PDE10A	Q9Y233	779 aa		13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	AAR2	Q9Y312	384 aa	Known RBP	13.64	□□□□□ -0.23
NPIPA1-206	ENST00000541836	PMPCB	O75439	489 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	BEST1	O76090	585 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	SIX3	O95343	332 aa	Predicted RBP	13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	C22orf31	O95567	290 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	ALPL	P05186	524 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	LINC00032	P0C843	101 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	SEMA3B	Q13214	749 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	TNFAIP1	Q13829	316 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	KYAT1	Q16773	422 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	GPR158	Q5T848	1215 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	BLOC1S3	Q6QNY0	202 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	RYBP	Q8N488	228 aa	Predicted RBP	13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	CHST13	Q8NET6	341 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	OR7A2P	Q8NGA2	310 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	COPS5	Q92905	334 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	NDEL1	Q9GZM8	345 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	TOR3A	Q9H497	397 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	PLEKHA5	Q9HAU0	1116 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	ZNF229	Q9UJW7	825 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	PCDHB3	Q9Y5E6	796 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	SNX5	Q9Y5X3	404 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	LRRC14B	A6NHZ5	514 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	FAM47E-STBD1	D6RA91	191 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836		M0R3G1	203 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	HBP1	O60381	514 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	CDK14	O94921	469 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	RABGGTB	P53611	331 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	FOXM1	Q08050	763 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	PAGE3	Q5JUK9	113 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	C6orf141	Q5SZD1	244 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	DENND5A	Q6IQ26	1287 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	BNIPL	Q7Z465	357 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	SLC22A16	Q86VW1	577 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	MICALL2	Q8IY33	904 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	KIAA2013	Q8IYS2	634 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	CRYBG2	Q8N1P7	616 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	HDAC2	Q92769	488 aa	Known RBP	13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	IL12RB2	Q99665	862 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	MUC13	Q9H3R2	512 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	VTA1	Q9NP79	307 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	SNTG2	Q9NY99	539 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	NOX1	Q9Y5S8	564 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836		A0A1W2PP18	115 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	MATN4	O95460	622 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	NADK	O95544	446 aa	Predicted RBP	13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	BMP4	P12644	408 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	LBP	P18428	481 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	AGXT	P21549	392 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	EDNRB	P24530	442 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	HRH2	P25021	359 aa		13.63	□□□□□ -0.23
NPIPA1-206	ENST00000541836	KCNK10	P57789	538 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms