RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ZNF419Q96HQ0 510 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-217ENST00000541578 RAB3IPQ96QF0 476 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-217ENST00000541578 ABHD1Q96SE0 405 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 KIFC3Q9BVG8 833 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 C1QTNF1Q9BXJ1 281 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 MRPL1Q9BYD6 325 aaKnown RBP4.32□□□□□ -1.72
SNHG1-217ENST00000541578 HRH4Q9H3N8 390 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 PLK3Q9H4B4 646 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 TXNRD2Q9NNW7 524 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 TMEM45AQ9NWC5 275 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 PLK2Q9NYY3 685 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 R3HDM2Q9Y2K5 976 aaKnown RBP4.32□□□□□ -1.72
SNHG1-217ENST00000541578 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-217ENST00000541578 TRPV2Q9Y5S1 764 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 MAU2Q9Y6X3 613 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 TRPM2O94759 1503 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 ATRNO75882 1429 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 ERBINQ96RT1 1412 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 RIMS2Q9UQ26 1411 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 NPHP3Q7Z494 1330 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 MYO5BQ9ULV0 1848 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-217ENST00000541578 AKR1B15C9JRZ8 316 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-217ENST00000541578 KCNAB3O43448 404 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 AVILO75366 819 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 LCKP06239 509 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 CCDC175P0C221 793 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 TFPIP10646 304 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 ACTN1P12814 892 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 GABRB1P18505 474 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 TFEBP19484 476 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 SCP2P22307 547 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 TBXAS1P24557 533 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-217ENST00000541578 THPOP40225 353 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 GPR12P47775 334 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 FOXG1P55316 489 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-217ENST00000541578 KRT83P78385 493 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 ZBTB16Q05516 673 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 MTX1Q13505 466 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 ODF2Q5BJF6 829 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 IGSF11Q5DX21 431 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 ERMARDQ5T6L9 678 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 VWA5B1Q5TIE3 1220 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 KIAA0930Q6ICG6 404 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-217ENST00000541578 ZNF474Q6S9Z5 364 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-217ENST00000541578 IL27RAQ6UWB1 636 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 PET117Q6UWS5 81 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 DEFB132Q7Z7B7 95 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 PIM3Q86V86 326 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 LINC00346Q8IVM7 164 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 OR8H3Q8N146 312 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 IGFBPL1Q8WX77 278 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 ELMOD3Q96FG2 381 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 PGAP3Q96FM1 320 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-217ENST00000541578 WACQ9BTA9 647 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 CCDC106Q9BWC9 280 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 MLXIPLQ9NP71 852 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 PSD3Q9NYI0 1048 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 GTF3C4Q9UKN8 822 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 UNC13BO14795 1591 aa4.31□□□□□ -1.72
SNHG1-217ENST00000541578 BRWD3Q6RI45 1802 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 A0A1W2PQF6 199 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 SLC22A23A1A5C7 686 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 CDRT15L2A8MXV6 281 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 FAM157AC9JC47 383 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 H3BQ06 376 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-217ENST00000541578 INSIG1O15503 277 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 RNMTO43148 476 aaKnown RBP4.3□□□□□ -1.72
SNHG1-217ENST00000541578 HCRTR2O43614 444 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 SLU7O95391 586 aaKnown RBP4.3□□□□□ -1.72
SNHG1-217ENST00000541578 SNHG28P0DPA3 235 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 SELLP14151 372 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 FDPSP14324 419 aaKnown RBP4.3□□□□□ -1.72
SNHG1-217ENST00000541578 MUTP22033 750 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 CLCN5P51795 746 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 EFNA5P52803 228 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 PMS2P54278 862 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 RAD23AP54725 363 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 PMPCAQ10713 525 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 CAMK2DQ13557 499 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 SCARB2Q14108 478 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 SEMA3AQ14563 771 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 ADIPOQQ15848 244 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 NCAPH2Q6IBW4 605 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 JADE1Q6IE81 842 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 AAGABQ6PD74 315 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 LCTLQ6UWM7 567 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 KBTBD6Q86V97 674 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 METTL23Q86XA0 190 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 TMC8Q8IU68 726 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 MMP21Q8N119 569 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 TMCO5AQ8N6Q1 288 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 MSANTD4Q8NCY6 345 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 ZNF548Q8NEK5 533 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-217ENST00000541578 SETD6Q8TBK2 473 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 WIPF2Q8TF74 440 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-217ENST00000541578 TMEM170AQ8WVE7 144 aa4.3□□□□□ -1.72
SNHG1-217ENST00000541578 MRPS27Q92552 414 aaKnown RBP4.3□□□□□ -1.72
SNHG1-217ENST00000541578 PTERQ96BW5 349 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms