RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 XKR5Q6UX68 686 aa16.15■□□□□ 0.18
TRIM65-203ENST00000540812 CPNE8Q86YQ8 564 aa16.15■□□□□ 0.18
TRIM65-203ENST00000540812 OR4D9Q8NGE8 314 aa16.15■□□□□ 0.18
TRIM65-203ENST00000540812 SLC37A2Q8TED4 501 aa16.15■□□□□ 0.18
TRIM65-203ENST00000540812 LRRN4Q8WUT4 740 aa16.15■□□□□ 0.18
TRIM65-203ENST00000540812 NKD1Q969G9 470 aa16.15■□□□□ 0.18
TRIM65-203ENST00000540812 COX14Q96I36 57 aa16.15■□□□□ 0.18
TRIM65-203ENST00000540812 NUP85Q9BW27 656 aa16.15■□□□□ 0.18
TRIM65-203ENST00000540812 KCNK4Q9NYG8 393 aa16.15■□□□□ 0.18
TRIM65-203ENST00000540812 IP6K2Q9UHH9 426 aa16.15■□□□□ 0.18
TRIM65-203ENST00000540812 PCDHGA3Q9Y5H0 932 aa16.15■□□□□ 0.18
TRIM65-203ENST00000540812 HEMK1Q9Y5R4 338 aaPredicted RBP16.15■□□□□ 0.18
TRIM65-203ENST00000540812 B3GALT1Q9Y5Z6 326 aa16.15■□□□□ 0.18
TRIM65-203ENST00000540812 A0A0J9YYE9 177 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 CYSRT1A8MQ03 144 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 INPP4BO15327 924 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 TRBC1P01850 177 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 CYP1A2P05177 515 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 GARSP41250 739 aaKnown RBP16.14■□□□□ 0.17
TRIM65-203ENST00000540812 ARSEP51690 589 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 GALNT2Q10471 571 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 SQSTM1Q13501 440 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 TRA2AQ13595 282 aaKnown RBP eCLIP16.14■□□□□ 0.17
TRIM65-203ENST00000540812 PEX6Q13608 980 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 NCBP2-AS2Q69YL0 99 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 ZNF765Q7L2R6 523 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 GALNT13Q8IUC8 556 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 ZSCAN1Q8NBB4 408 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 FAM71BQ8TC56 605 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 MAML1Q92585 1016 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 ART4Q93070 314 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 RIOK2Q9BVS4 552 aaKnown RBP16.14■□□□□ 0.17
TRIM65-203ENST00000540812 POLR1EQ9GZS1 481 aaKnown RBP16.14■□□□□ 0.17
TRIM65-203ENST00000540812 CBX8Q9HC52 389 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 OCIAD1Q9NX40 245 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 CHKBQ9Y259 395 aa16.14■□□□□ 0.17
TRIM65-203ENST00000540812 OAS3Q9Y6K5 1087 aaKnown RBP16.14■□□□□ 0.17
TRIM65-203ENST00000540812 PRLP01236 227 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 CSTF2P33240 577 aaKnown RBP eCLIP16.13■□□□□ 0.17
TRIM65-203ENST00000540812 SSR1P43307 286 aaKnown RBP16.13■□□□□ 0.17
TRIM65-203ENST00000540812 TPM4P67936 248 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 NIPAL4Q0D2K0 466 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 DPYSL3Q14195 570 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 ATP13A4Q4VNC1 1196 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 FIGNQ5HY92 759 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 ALG1LQ6GMV1 187 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 NLRP8Q86W28 1048 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 LRRC49Q8IUZ0 686 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 NDUFAF2Q8N183 169 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 AGBL5Q8NDL9 886 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 SLC12A9Q9BXP2 914 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 TDRD1Q9BXT4 1180 aaKnown RBP16.13■□□□□ 0.17
TRIM65-203ENST00000540812 RBM22Q9NW64 420 aaKnown RBP eCLIP16.13■□□□□ 0.17
TRIM65-203ENST00000540812 RCOR3Q9P2K3 495 aaPredicted RBP16.13■□□□□ 0.17
TRIM65-203ENST00000540812 CNOT6Q9ULM6 557 aaKnown RBP16.13■□□□□ 0.17
TRIM65-203ENST00000540812 PRKAB1Q9Y478 270 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 TTLL3Q9Y4R7 772 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 COL12A1Q99715 3063 aa16.13■□□□□ 0.17
TRIM65-203ENST00000540812 SPENQ96T58 3664 aaKnown RBP16.12■□□□□ 0.17
TRIM65-203ENST00000540812 EFCAB7A8K855 629 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 TERTO14746 1132 aaKnown RBP16.12■□□□□ 0.17
TRIM65-203ENST00000540812 CLDN7O95471 211 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 ASMTLO95671 621 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 SERPINC1P01008 464 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 HLA-DQB2P05538 268 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 LIFP15018 202 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 ZNF30P17039 623 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 UGT1A3P35503 534 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 GJC1P36383 396 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 FASLGP48023 281 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 ATP1A2P50993 1020 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 EPHB1P54762 984 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 PAFAH1B3Q15102 231 aaKnown RBP16.12■□□□□ 0.17
TRIM65-203ENST00000540812 TMEM71Q6P5X7 295 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 LUZP1Q86V48 1076 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 NRSN1Q8IZ57 195 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 SFRP1Q8N474 314 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 ARRDC2Q8TBH0 407 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 COL26A1Q96A83 441 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 WDR24Q96S15 920 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 SLC38A3Q99624 504 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 DPYSL5Q9BPU6 564 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 DDA1Q9BW61 102 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 ZMYND15Q9H091 742 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 SLC39A1Q9NY26 324 aa16.12■□□□□ 0.17
TRIM65-203ENST00000540812 UBR5O95071 2799 aaPredicted RBP16.11■□□□□ 0.17
TRIM65-203ENST00000540812 A0A087X0T9 212 aa16.11■□□□□ 0.17
TRIM65-203ENST00000540812 MYO1FO00160 1098 aa16.11■□□□□ 0.17
TRIM65-203ENST00000540812 MATN3O15232 486 aa16.11■□□□□ 0.17
TRIM65-203ENST00000540812 DNAJC6O75061 913 aa16.11■□□□□ 0.17
TRIM65-203ENST00000540812 ATP1A1P05023 1023 aaKnown RBP16.11■□□□□ 0.17
TRIM65-203ENST00000540812 PYGLP06737 847 aa16.11■□□□□ 0.17
TRIM65-203ENST00000540812 FAM228BP0C875 321 aa16.11■□□□□ 0.17
TRIM65-203ENST00000540812 CSRP3P50461 194 aa16.11■□□□□ 0.17
TRIM65-203ENST00000540812 GPLD1P80108 840 aa16.11■□□□□ 0.17
TRIM65-203ENST00000540812 GBE1Q04446 702 aa16.11■□□□□ 0.17
TRIM65-203ENST00000540812 LRP8Q14114 963 aa16.11■□□□□ 0.17
TRIM65-203ENST00000540812 SNAP47Q5SQN1 464 aa16.11■□□□□ 0.17
TRIM65-203ENST00000540812 CCDC122Q5T0U0 273 aa16.11■□□□□ 0.17
TRIM65-203ENST00000540812 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms