RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 B3GALT1Q9Y5Z6 326 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 ARHGEF17Q96PE2 2063 aaPredicted RBP11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 DUX1O43812 170 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 RAD1O60671 282 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 TCF4P15884 667 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 MAN1A1P33908 653 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 NFKB2Q00653 900 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 PTSQ03393 145 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 PTPRRQ15256 657 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 CCDC183Q5T5S1 534 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 TIGD7Q6NT04 549 aaPredicted RBP11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 WDR74Q6RFH5 385 aaPredicted RBP11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 CACNA2D3Q8IZS8 1091 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 BMPERQ8N8U9 685 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 OR10G6Q8NH81 332 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 FAM71BQ8TC56 605 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 SLC37A2Q8TED4 501 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 SCAMP4Q969E2 229 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 FATE1Q969F0 183 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 SH3KBP1Q96B97 665 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 AHCYL2Q96HN2 611 aaKnown RBP11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 SLC38A3Q99624 504 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 ZPBPQ9BS86 351 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 EFHD1Q9BUP0 239 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 TRIM4Q9C037 500 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 STN1Q9H668 368 aaKnown RBP11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 SARS2Q9NP81 518 aaKnown RBP11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 NT5MQ9NPB1 228 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 HAUS2Q9NVX0 235 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 SLC39A1Q9NY26 324 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 TMEM9Q9P0T7 183 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 VPS18Q9P253 973 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 IP6K2Q9UHH9 426 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 CD84Q9UIB8 345 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 TMEM98Q9Y2Y6 226 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 PLEKHM1Q9Y4G2 1056 aa11.93□□□□□ -0.5
CBX3P4-202ENST00000540428 EFCAB7A8K855 629 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 ZNF891A8MT65 544 aaPredicted RBP11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 SMTNL1A8MU46 457 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 GOLGA6L22H0YM25 854 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 SLC2A4P14672 509 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 LIFP15018 202 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 CA4P22748 312 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 IL4RP24394 825 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 MPSTP25325 297 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 GARSP41250 739 aaKnown RBP11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 CCR10P46092 362 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 STC1P52823 247 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 EPHB1P54762 984 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 POLE2P56282 527 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 RPL26P61254 145 aaKnown RBP11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 SLC25A11Q02978 314 aaKnown RBP11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 HHEXQ03014 270 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 TYRO3Q06418 890 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 ITKQ08881 620 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 GALNT2Q10471 571 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 KRT81Q14533 505 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 FIGNQ5HY92 759 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 TXNRD3NBQ6F5E7 133 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 RFLNAQ6ZTI6 216 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 ARHGAP22Q7Z5H3 698 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 FAM129CQ86XR2 697 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 MAML1Q92585 1016 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 SLC45A3Q96JT2 553 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 LYSMD1Q96S90 227 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 TDRD1Q9BXT4 1180 aaKnown RBP11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 SPRY4Q9C004 299 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 ZMYND15Q9H091 742 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 RMI1Q9H9A7 625 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 OCIAD1Q9NX40 245 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 PILRAQ9UKJ1 303 aa11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 RPL26L1Q9UNX3 145 aaKnown RBP11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 BZW2Q9Y6E2 419 aaKnown RBP11.92□□□□□ -0.5
CBX3P4-202ENST00000540428 A0A0U1RQS6 177 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 A0A1B0GTH6 734 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 RGSL1A5PLK6 1076 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 MATN3O15232 486 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 DNAJC6O75061 913 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 MAP3K6O95382 1288 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 MBD3O95983 291 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 SKILP12757 684 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 CCNCP24863 283 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 MAP4P27816 1152 aaKnown RBP11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 ZNF165P49910 485 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 EPHA4P54764 986 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 MC2RQ01718 297 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 KCNAB2Q13303 367 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 PAFAH1B3Q15102 231 aaKnown RBP11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 CCDC122Q5T0U0 273 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 ANKS6Q68DC2 871 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 IYDQ6PHW0 289 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 CEACAM20Q6UY09 585 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 MARK2Q7KZI7 788 aaKnown RBP11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 TRIM74Q86UV6 250 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 NLGN4XQ8N0W4 816 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 AVL9Q8NBF6 648 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 NLGN4YQ8NFZ3 816 aaPredicted RBP11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 ZNF564Q8TBZ8 553 aaPredicted RBP11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 RTP4Q96DX8 246 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms